| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2878 |
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| Symbol | |
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| ID | 8253986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3425448 |
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| End bp | 3426566 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936523 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003093138 |
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| Protein GI | 255532766 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.587986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA ATACCGGGAC AGATCCTCAG GAAGATCCTG CACCCACACT TGAGACACGC
TCCTTTACGT CACTGGATAT TGCTAAACTT GCCATAACCG CTGCCAATTT AGGCGTCTGG
TTTATAGATG AACAGACAGG TACCTTTCTT CCCTCTGCAC GCATGAAAGA ACTCCACGGC
TATCTGGCAG AAGAAGAGAT GTCCTTTGAA GCTGCACTTG TGCAAATACC AAAAAAATAT
AGGCAGAAAG TGATCAGCGT CCTAAAAGAA GCCAGGAGCC GAAAGGAACC ATTTTATCTG
GAATATCCAG TGATAGGATT TCATGACCAA CAACAACGAT GGCTCAGGGT AATGGGTGGA
TCAGAGCAAC CCACAACCGA AACCAGCCAG TTCTCGGGTG TAATCATGGA CATCACTGAC
ATCAAGCAAA ATGAACTGCG CAGGAGCAAA TTCATAGGAA TGGTCAGCCA TGAACTCAAA
ACGCCACTTA CAGCCTTGAA AGCATATATT CAGCTCCTGA ACAAATGGGC AAAACAAAAG
CGGGACAGTT TCAGTATAGG TGCATTGTCC AAACTGGAAA AACAAGTAAA AAAAATGACT
ACAATGATCA ATGGCTTCCT GAATTTTTCA GGAGCAGAAT CTGGCAAAAT CCATTTGAAC
AAGTCAACTT TTGATATGAT CCCCCTGTTG AACGAGGTAA TCGAGGAAAA TAAAGACATA
TATCCCGACC ATGCCATCAG CCTGGCAGCT TCCCAGCAGA TGGTGGTAAA TGCAGACCGG
GACAAAATAG AGCAAGTGAT CATCAACCTG ATCAGCAATG CCGTTAAATA CTCCGATCCC
GGAAAACCTA TAGCAGTTAC CTGCCTGCAG GAAAAAACCA GGTTAATATT GAGCGTAAAA
GATACCGGAA TGGGAATTGA AGAAAAAGAC ATAGCCAAAC TCTTCAAACC GCATTCCAGG
ATAAAAACCA GCAAAACGGA AAATATATCA GGCTTTGGCA TCGGACTCTA CCTCTGCGCT
GAGATCATTA AATACCATGG TGGGGAAATT GGTGTAAAAA GTGAACCAGG CCACGGCAGT
ACGTTTTGGT TTAGCTTAAA AATGAAAGAG CAGCCTTAA
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| Protein sequence | MENNTGTDPQ EDPAPTLETR SFTSLDIAKL AITAANLGVW FIDEQTGTFL PSARMKELHG
YLAEEEMSFE AALVQIPKKY RQKVISVLKE ARSRKEPFYL EYPVIGFHDQ QQRWLRVMGG
SEQPTTETSQ FSGVIMDITD IKQNELRRSK FIGMVSHELK TPLTALKAYI QLLNKWAKQK
RDSFSIGALS KLEKQVKKMT TMINGFLNFS GAESGKIHLN KSTFDMIPLL NEVIEENKDI
YPDHAISLAA SQQMVVNADR DKIEQVIINL ISNAVKYSDP GKPIAVTCLQ EKTRLILSVK
DTGMGIEEKD IAKLFKPHSR IKTSKTENIS GFGIGLYLCA EIIKYHGGEI GVKSEPGHGS
TFWFSLKMKE QP
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