| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3177 |
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| Symbol | |
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| ID | 5540675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4123430 |
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| End bp | 4126345 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895298 |
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| Product | adenylate/guanylate cyclase with GAF and PAS/PAC sensors |
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| Protein accession | YP_001433249 |
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| Protein GI | 156743120 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain)
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TTGCACATAT CCTGGCAGTG GACGACGACG CCAGCGTGCG TCGCATGCTC
CAGATTCTGC TGACGAACGC CGGGTATCGC GTTTCTGTTG CGAGTACCGG CGAAGAAGCC
CTGGCGTATC TGGAACTGGT CACGCCCGAT CTGGTGCTCA TGGATGTATC ATTGCCGGGG
CTGAGCGGCC AGCATGTGAT GGAGCGCGTC AAATCTGATC CAGATCGCCC CTTCATCCCT
GTGATCCTGA TCACCGGTTA TGGCGACCCG GAGGCGAAAG TTGCGGCGCT CGATGCGGGC
GCCGACGATT TTCTGGTGAA ACCGGTCGAT CTGACCGAAC TGCTGGCGCG GGTGCGCGCA
ATGCTGCGCC TGCAACGCAG TCAGCGATCA TTGCGCGCTG AGCAGCGAAA GACGGAACTG
TTGCTCCATC TGACCCGCGA ACTGGGAACG ACGCTGGATC TTGATCAGTT GTTGACCCAG
TTTCTCAATC GGCTTGCCGA TGCTGTCGGC GCCGTGCGCG CCAGCATCCT GGCGCTCACC
GGCGATCAGC CGCGCCTGTT CTCCAGCACG CGCAATCGGC CAACCATTCC GCTGAGCGAT
ATTCTAGGGC AGGGTGTCGC CGGATGGGTG CTTCGTGAGC GGAAACCGTT GATTATTGAC
GATACCCGCG ACGATCCACG ATGGATCGCG GTGAATGCCC AGCAGCGCGC GGTGCGCAGT
GTTGCTGCCG TGCCGCTGGT GCGCGAGGGG CGCGTTCTGG CTGCCATTAC GCTCGTTCAC
CACACGCCAG GCTATTTCAA CCACGACCAC CTGGAGTTGC TGAATGCTGT GGCAGCACAG
AGCGCGATTG CACTCGAAAA TGCGGAGTTG TTCCATCTGA CGCGCATGCA GCGCGACCTG
CTCGAGCGTC GCGCTGAAGA ACTGCAACGC ATCAATCAGA TCAGCCGTCA CCTGACAGAG
TTAATGAGTC CTGATCAGTT GCTGCGGCTG GTGGTGCATT TGATCCACCA CACCTTTGGC
TATCCGTTGG TTGCCGTTGC GTTGCACGAT GATGAGCGCC TGGCATTGGA AGCCGCTGCG
GGCAGCGCAA GTATCGAACG GTTGATCGGG CAGGCGATCT CGCCCGACAC CAGCGCCGCC
GGGCGGGCGA TTGCACAGAG CGAAGCGTAC TATGTCGCCG ATTTTCTTCA GACCGATTGC
GCTCCATTGA CGGGAGTTGA GCGGAGCGTG CGTTCGGAAC TGGCGGTTCC GATTCAAACG
GCACGCCAGG TGTTTGGCGC GCTTTCGGTC ATGGCGTATA CCCCCAATGC GTTCGGCGAT
GCGGATGTTC GATTGCTGTC AACCCTGGCG AGCCAGTTGG GTATTGCGCT CGATAACGCG
CGCCTGTTCA ACATGGAGCA GCGCCGCGTT CGTCAGCTCG GCACGGTGAA TAATCTGTCG
CTTGCCATGA CGGCGCGTCT GGATGCAGCG GAAAATCTGA CGATTGCAGC GCGCGTGATT
GCATCTATTT TTGAGGTTAC TGCCTGTGGC ATTGTGCTGA CCAACCCCAG AGTCCAGAGC
ATGCGGCATA TGGTGTTTGC AACCGATGCC GCACGGGATC GTCTGCCCTG GCGCGATCTT
GCTGAAACGG TCGTTCTTTC CGCGCCACAG GTTGTGAGGG CGGACGATGC GCTTCTGGCG
CTATGCGCTC GCGCGCTTGT GGGCGCCGGA ATCGCAGCGC TGGCGCTGGC GCCGTTGCTG
GCAAACGGTA AACAGATTGG GTTGGTGGCG CTCGATGTCA CCGGACATGA GCGACAGTTT
CAGGCGACCG ATTTGACGCT GCTCGAGACG GTTGCAAGTT TGCTGGCGCA GGTGATTGAG
AATGCCTGCC TGTATCGCGA GGTGGAAGAC GAACGTTCGA CACTCGGCGC TGTGTTGCGC
AGCGCCGCCG ATCCGATTCT GCTGATCGAT CCGCACAATC GATTGTTGCT GGCAAATCCC
GCCGCCGAGC AGCGCCTTCA CCTCGGAGAA GCGATCGGGC GGGCAATTGA CCAGGCTGTG
GATCATAGCG GTCTGCTTCG TGCTCTGAGT CGCGACTCCT TGAATGGTCA GTCGATGATG
GAAGTCACCC TTGCCGATGG TGCGACCTTC AACGTTAGCG TCGCTCCGGT GCGTGGCGCC
AACGATGCGT TAATTGGACG GGTGGCGGTG ATGCAGGATA TTACTGCGAT CAAAGAACTC
GAGCGCGCAG AGCAGGAACG CCTGCGTGCT ATGTTCCGGC GCTACGTATC GCCGCAGGTG
GTCGAAGAAG TGCTGGCGGG CGGTGGTGAG TTCGGAGCGC CGCAGGAGCG CGATATTGTG
GTGCTGTTTG CCGATATTCG CGGCTATACG ACGCTCGCTG AAGGTCTGGC GCCGCAAATT
CTCGTGCATC AGATCCTCAA TCGCTATTTC ACCGCTATGA CCGAGGCGCT CTACCGACAT
GGCGGGACGG TCGATAAGTT TCTGGGAGAT GGGTTGATCG GTGTGTTTGG CGTGCCGATT
GCGCGGGATG ACGATATTCC CCGGTCGTTA CGCGCAGCAG TCGATCTCCA GCTGGCGTTC
GCCGATCTTC GGAATGTCTG GCGCCGCGAT CTCGGTCTCG ACCTTGGCAT GGGGGTGGGG
ATTGCGTATG GACCGGCGCT CGTCGGCAAT ATTGGGTCGC CGCAGCGCCT CGATTACACG
GTAATTGGGG ATGTCGTCAA TACTGCTAAC CGCTTGAGCG GTCTGGCGCG CGCCGATCAG
ATCATTGTTT CGCATCGCCT GATCGATGCG CTGCCGCTGG GAGATGATCT GCCCTGGTTG
TTGCGTCCGA TTGGTCCGGT GATGCTCAAG GGGAAGCACG AGCCGCATAT GGTGTATGAG
ATTGTGTATC AGATCGCGGT GTCGGACGAT GGATGA
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| Protein sequence | MTELAHILAV DDDASVRRML QILLTNAGYR VSVASTGEEA LAYLELVTPD LVLMDVSLPG
LSGQHVMERV KSDPDRPFIP VILITGYGDP EAKVAALDAG ADDFLVKPVD LTELLARVRA
MLRLQRSQRS LRAEQRKTEL LLHLTRELGT TLDLDQLLTQ FLNRLADAVG AVRASILALT
GDQPRLFSST RNRPTIPLSD ILGQGVAGWV LRERKPLIID DTRDDPRWIA VNAQQRAVRS
VAAVPLVREG RVLAAITLVH HTPGYFNHDH LELLNAVAAQ SAIALENAEL FHLTRMQRDL
LERRAEELQR INQISRHLTE LMSPDQLLRL VVHLIHHTFG YPLVAVALHD DERLALEAAA
GSASIERLIG QAISPDTSAA GRAIAQSEAY YVADFLQTDC APLTGVERSV RSELAVPIQT
ARQVFGALSV MAYTPNAFGD ADVRLLSTLA SQLGIALDNA RLFNMEQRRV RQLGTVNNLS
LAMTARLDAA ENLTIAARVI ASIFEVTACG IVLTNPRVQS MRHMVFATDA ARDRLPWRDL
AETVVLSAPQ VVRADDALLA LCARALVGAG IAALALAPLL ANGKQIGLVA LDVTGHERQF
QATDLTLLET VASLLAQVIE NACLYREVED ERSTLGAVLR SAADPILLID PHNRLLLANP
AAEQRLHLGE AIGRAIDQAV DHSGLLRALS RDSLNGQSMM EVTLADGATF NVSVAPVRGA
NDALIGRVAV MQDITAIKEL ERAEQERLRA MFRRYVSPQV VEEVLAGGGE FGAPQERDIV
VLFADIRGYT TLAEGLAPQI LVHQILNRYF TAMTEALYRH GGTVDKFLGD GLIGVFGVPI
ARDDDIPRSL RAAVDLQLAF ADLRNVWRRD LGLDLGMGVG IAYGPALVGN IGSPQRLDYT
VIGDVVNTAN RLSGLARADQ IIVSHRLIDA LPLGDDLPWL LRPIGPVMLK GKHEPHMVYE
IVYQIAVSDD G
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