Gene Mext_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0967 
Symbol 
ID5834442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1046838 
End bp1048211 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content70% 
IMG OID641366749 
Productdiguanylate cyclase 
Protein accessionYP_001638443 
Protein GI163850400 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.555277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0207283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC GCGTCCTGAT CGTGGATGAT CTCTACCCCA ACGTCCGGCT GCTCGAGACA 
AAACTGTCTC TCGAGTATTT CGACGTGGTC GTGGCGATGA ATGGGCCAGA CGCCCTGGCC
ATTTGCGAGA AGGGCGAATG CGACGTCGTT CTCCTCGACG TGATGATGCC GGGCATGGAC
GGCTTCGAGG TTTGCCGCCG GCTCAAGGCC AATCCCGCCA CCGCCCATCT GCCGGTGGTG
ATCGTCACCG CCCTCGATCA GCCCGCCGAC CGGCTGCGGG GCCTGGATGC GGGCGCCGAC
GACTTCCTGA CCAAGCCCAT CGACGACACC GCGCTGATGA CGCGGGTGCG CAGCCTCGTG
CGGCTGAAGG CGGTGACGGA CGAGCTGCGC TCCCGCGCCC TGGAGACGCG TGAGATCGGC
GGCCCCGACC CCCTGGTTCT CGCCGCCGCC GATACCGGCG AGGGTGCGCG CATTCTCCTC
GTGGAGGACC GGGCGAGCGC CATCGACCGC ATCAGCACGG CGCTCTCCCA GCACCATCAG
GTCACCGTGG AGACCGACCC GCACCGCGCC CTGGTGCGGG CGCCCGAGGA AGGCTTCGAC
CTCGCCCTGG TGAGCCTCGA TCTCGAAGGC TTCGACGGGC TGCGCCTGTG CAGCCAGCTC
CGCTCGCTGG AGCGGACCCG CAGCATGGCG CTGATCATGC TCGGCGAGAT GCACGAGAAA
ACGCGCATCA CCCGCGGCCT CGAATTCGGC GTCAACGACT ACCTGCTGCG CCCGGTCGAC
CGCAACGAGC TGATCGCGCG GGTGCGCACG CAGGTGCGGC GGCGGCGCTT CTCCGAGACC
CTGCGCGGAG CGCTCCATGC CTCGATGGAA CTCGCGATCA CCGACGACCT GACCGGCCTG
CACAACCGGC GCTACCTCGA CCGCCATCTC GGGCCGGTCT TCGGTGAGGC GGCCCTGCAG
GAGAAGGGCC TCGCCTGCCT GCTCCTCGAC ATCGACCGCT TCAAGCTGAT CAACGACACC
TACGGCCACG AGGCCGGCGA CGAGGTGCTG CGCGCCTTCG CCGAGCGCAT CCGCCAGTAT
GTGCGGCCGA TGGACATCCT CGCCCGCTAC GGCGGCGAGG AGATCGTGAT GGTGGTGCCC
GGCGCCGAAC TGCCCGATGC CCGCGCCATC GCCGAGCGCA TCCGTCACCG GATCGAGGCG
ACGCCCTTCG CCATCGACGG CGGGACGCGC GACATCGGCG TGACCGTCTC GGTCGGCGTC
TCCGTGCGGC GCGCGACCGA TACGGGTCCG TCCGACCTGC TCAAGCGCGC CGACACCGCG
CTCTACCGCG CCAAGTCCTT CGGCCGGAAC CGGGTCGAGG CCGCTGCCGC GTAG
 
Protein sequence
MSARVLIVDD LYPNVRLLET KLSLEYFDVV VAMNGPDALA ICEKGECDVV LLDVMMPGMD 
GFEVCRRLKA NPATAHLPVV IVTALDQPAD RLRGLDAGAD DFLTKPIDDT ALMTRVRSLV
RLKAVTDELR SRALETREIG GPDPLVLAAA DTGEGARILL VEDRASAIDR ISTALSQHHQ
VTVETDPHRA LVRAPEEGFD LALVSLDLEG FDGLRLCSQL RSLERTRSMA LIMLGEMHEK
TRITRGLEFG VNDYLLRPVD RNELIARVRT QVRRRRFSET LRGALHASME LAITDDLTGL
HNRRYLDRHL GPVFGEAALQ EKGLACLLLD IDRFKLINDT YGHEAGDEVL RAFAERIRQY
VRPMDILARY GGEEIVMVVP GAELPDARAI AERIRHRIEA TPFAIDGGTR DIGVTVSVGV
SVRRATDTGP SDLLKRADTA LYRAKSFGRN RVEAAAA