| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0967 |
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| Symbol | |
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| ID | 5834442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1046838 |
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| End bp | 1048211 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641366749 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001638443 |
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| Protein GI | 163850400 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.555277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0207283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC GCGTCCTGAT CGTGGATGAT CTCTACCCCA ACGTCCGGCT GCTCGAGACA
AAACTGTCTC TCGAGTATTT CGACGTGGTC GTGGCGATGA ATGGGCCAGA CGCCCTGGCC
ATTTGCGAGA AGGGCGAATG CGACGTCGTT CTCCTCGACG TGATGATGCC GGGCATGGAC
GGCTTCGAGG TTTGCCGCCG GCTCAAGGCC AATCCCGCCA CCGCCCATCT GCCGGTGGTG
ATCGTCACCG CCCTCGATCA GCCCGCCGAC CGGCTGCGGG GCCTGGATGC GGGCGCCGAC
GACTTCCTGA CCAAGCCCAT CGACGACACC GCGCTGATGA CGCGGGTGCG CAGCCTCGTG
CGGCTGAAGG CGGTGACGGA CGAGCTGCGC TCCCGCGCCC TGGAGACGCG TGAGATCGGC
GGCCCCGACC CCCTGGTTCT CGCCGCCGCC GATACCGGCG AGGGTGCGCG CATTCTCCTC
GTGGAGGACC GGGCGAGCGC CATCGACCGC ATCAGCACGG CGCTCTCCCA GCACCATCAG
GTCACCGTGG AGACCGACCC GCACCGCGCC CTGGTGCGGG CGCCCGAGGA AGGCTTCGAC
CTCGCCCTGG TGAGCCTCGA TCTCGAAGGC TTCGACGGGC TGCGCCTGTG CAGCCAGCTC
CGCTCGCTGG AGCGGACCCG CAGCATGGCG CTGATCATGC TCGGCGAGAT GCACGAGAAA
ACGCGCATCA CCCGCGGCCT CGAATTCGGC GTCAACGACT ACCTGCTGCG CCCGGTCGAC
CGCAACGAGC TGATCGCGCG GGTGCGCACG CAGGTGCGGC GGCGGCGCTT CTCCGAGACC
CTGCGCGGAG CGCTCCATGC CTCGATGGAA CTCGCGATCA CCGACGACCT GACCGGCCTG
CACAACCGGC GCTACCTCGA CCGCCATCTC GGGCCGGTCT TCGGTGAGGC GGCCCTGCAG
GAGAAGGGCC TCGCCTGCCT GCTCCTCGAC ATCGACCGCT TCAAGCTGAT CAACGACACC
TACGGCCACG AGGCCGGCGA CGAGGTGCTG CGCGCCTTCG CCGAGCGCAT CCGCCAGTAT
GTGCGGCCGA TGGACATCCT CGCCCGCTAC GGCGGCGAGG AGATCGTGAT GGTGGTGCCC
GGCGCCGAAC TGCCCGATGC CCGCGCCATC GCCGAGCGCA TCCGTCACCG GATCGAGGCG
ACGCCCTTCG CCATCGACGG CGGGACGCGC GACATCGGCG TGACCGTCTC GGTCGGCGTC
TCCGTGCGGC GCGCGACCGA TACGGGTCCG TCCGACCTGC TCAAGCGCGC CGACACCGCG
CTCTACCGCG CCAAGTCCTT CGGCCGGAAC CGGGTCGAGG CCGCTGCCGC GTAG
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| Protein sequence | MSARVLIVDD LYPNVRLLET KLSLEYFDVV VAMNGPDALA ICEKGECDVV LLDVMMPGMD
GFEVCRRLKA NPATAHLPVV IVTALDQPAD RLRGLDAGAD DFLTKPIDDT ALMTRVRSLV
RLKAVTDELR SRALETREIG GPDPLVLAAA DTGEGARILL VEDRASAIDR ISTALSQHHQ
VTVETDPHRA LVRAPEEGFD LALVSLDLEG FDGLRLCSQL RSLERTRSMA LIMLGEMHEK
TRITRGLEFG VNDYLLRPVD RNELIARVRT QVRRRRFSET LRGALHASME LAITDDLTGL
HNRRYLDRHL GPVFGEAALQ EKGLACLLLD IDRFKLINDT YGHEAGDEVL RAFAERIRQY
VRPMDILARY GGEEIVMVVP GAELPDARAI AERIRHRIEA TPFAIDGGTR DIGVTVSVGV
SVRRATDTGP SDLLKRADTA LYRAKSFGRN RVEAAAA
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