More than 300 homologs were found in PanDaTox collection
for query gene Gobs_4602 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  100 
 
 
226 aa  444  1.0000000000000001e-124  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  80.97 
 
 
229 aa  371  1e-102  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  81.78 
 
 
226 aa  372  1e-102  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  78.32 
 
 
226 aa  367  1e-101  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  80 
 
 
229 aa  367  1e-101  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  78.32 
 
 
226 aa  366  1e-100  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  79.11 
 
 
226 aa  366  1e-100  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  77.78 
 
 
226 aa  362  2e-99  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  80 
 
 
231 aa  362  3e-99  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  77.19 
 
 
228 aa  360  1e-98  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  78.76 
 
 
226 aa  359  2e-98  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  76.75 
 
 
228 aa  358  5e-98  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  76.21 
 
 
227 aa  356  9.999999999999999e-98  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  79.56 
 
 
225 aa  356  1.9999999999999998e-97  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  77.33 
 
 
228 aa  355  2.9999999999999997e-97  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  76.32 
 
 
228 aa  355  3.9999999999999996e-97  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  76.11 
 
 
226 aa  354  6.999999999999999e-97  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  77.78 
 
 
230 aa  353  1e-96  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  75.88 
 
 
228 aa  353  1e-96  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  75.88 
 
 
228 aa  353  1e-96  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  75.88 
 
 
228 aa  353  1e-96  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  75.88 
 
 
229 aa  350  1e-95  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  74.56 
 
 
229 aa  348  4e-95  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  79.11 
 
 
226 aa  345  3e-94  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_009664  Krad_0896  two component transcriptional regulator, winged helix family  80.97 
 
 
226 aa  345  5e-94  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232326  hitchhiker  0.00518822 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  74.78 
 
 
226 aa  342  2.9999999999999997e-93  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0337  two component transcriptional regulator  77.97 
 
 
227 aa  327  8e-89  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  72.12 
 
 
228 aa  327  9e-89  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  73.13 
 
 
229 aa  323  9e-88  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0404  two component transcriptional regulator  77.97 
 
 
227 aa  322  3e-87  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00316128 
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  68.67 
 
 
237 aa  316  2e-85  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  66.37 
 
 
226 aa  306  1.0000000000000001e-82  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_013530  Xcel_2969  two component transcriptional regulator, winged helix family  68.31 
 
 
246 aa  306  2.0000000000000002e-82  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_31880  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  72.81 
 
 
231 aa  303  2.0000000000000002e-81  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  62.82 
 
 
234 aa  295  3e-79  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0657  two component transcriptional regulator, winged helix family  73.04 
 
 
235 aa  294  1e-78  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.118815  hitchhiker  0.000311431 
 
 
-
 
NC_012669  Bcav_0771  two component transcriptional regulator, winged helix family  68.53 
 
 
233 aa  282  3.0000000000000004e-75  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.204872  normal  0.13372 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  60.44 
 
 
242 aa  257  9e-68  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  50.88 
 
 
236 aa  235  5.0000000000000005e-61  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  49.11 
 
 
229 aa  234  9e-61  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  50 
 
 
235 aa  227  1e-58  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  51.77 
 
 
237 aa  226  3e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  48.67 
 
 
232 aa  225  4e-58  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  49.56 
 
 
236 aa  224  1e-57  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  49.78 
 
 
235 aa  223  1e-57  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  48.9 
 
 
237 aa  223  1e-57  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  49.78 
 
 
235 aa  224  1e-57  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  49.78 
 
 
235 aa  223  2e-57  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  49.78 
 
 
235 aa  223  2e-57  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  49.78 
 
 
235 aa  222  4e-57  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  49.78 
 
 
235 aa  222  4e-57  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  49.78 
 
 
235 aa  222  4e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  49.78 
 
 
235 aa  222  4e-57  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  49.78 
 
 
235 aa  222  4e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  49.78 
 
 
235 aa  222  4e-57  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  49.78 
 
 
235 aa  222  4e-57  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  48.89 
 
 
230 aa  221  4.9999999999999996e-57  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  47.79 
 
 
235 aa  220  9.999999999999999e-57  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  48.28 
 
 
235 aa  219  3e-56  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  47.11 
 
 
256 aa  218  7.999999999999999e-56  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  50.45 
 
 
230 aa  217  1e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  49.78 
 
 
237 aa  216  2e-55  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  50 
 
 
235 aa  216  2e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  51.72 
 
 
239 aa  216  2.9999999999999998e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  47.09 
 
 
232 aa  216  2.9999999999999998e-55  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  46.55 
 
 
233 aa  214  5.9999999999999996e-55  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  46.55 
 
 
233 aa  214  5.9999999999999996e-55  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  47.11 
 
 
230 aa  214  5.9999999999999996e-55  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  49.14 
 
 
233 aa  214  7e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  47.3 
 
 
230 aa  214  9e-55  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  47.58 
 
 
233 aa  214  9.999999999999999e-55  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  46.15 
 
 
236 aa  214  9.999999999999999e-55  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  47.11 
 
 
238 aa  214  9.999999999999999e-55  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  46.49 
 
 
239 aa  213  1.9999999999999998e-54  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_010718  Nther_2903  two component transcriptional regulator, winged helix family  46.05 
 
 
234 aa  213  1.9999999999999998e-54  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  47.35 
 
 
230 aa  213  2.9999999999999995e-54  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  46.9 
 
 
230 aa  212  3.9999999999999995e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_011725  BCB4264_A4647  DNA-binding response regulator  44 
 
 
230 aa  212  4.9999999999999996e-54  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  50.89 
 
 
236 aa  211  7e-54  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_011773  BCAH820_4650  DNA-binding response regulator  43.56 
 
 
230 aa  211  7.999999999999999e-54  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  43.95 
 
 
229 aa  211  1e-53  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00709514 
 
 
-
 
NC_005957  BT9727_4272  response regulator  43.56 
 
 
230 aa  210  1e-53  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.760233  n/a   
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  46.49 
 
 
242 aa  211  1e-53  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_011658  BCAH187_A4663  DNA-binding response regulator  43.56 
 
 
230 aa  211  1e-53  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4433  DNA-binding response regulator  43.56 
 
 
230 aa  209  2e-53  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50.45 
 
 
240 aa  209  2e-53  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  49.35 
 
 
250 aa  210  2e-53  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_007530  GBAA_4777  DNA-binding response regulator  43.56 
 
 
230 aa  209  2e-53  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4662  DNA-binding response regulator  43.11 
 
 
230 aa  209  3e-53  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  46.36 
 
 
230 aa  209  3e-53  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  47.09 
 
 
227 aa  209  4e-53  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_013170  Ccur_02230  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  44.39 
 
 
229 aa  209  4e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0439  two component transcriptional regulator  44.89 
 
 
225 aa  209  4e-53  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000223011  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  44.93 
 
 
239 aa  209  4e-53  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  47.77 
 
 
235 aa  209  4e-53  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  49.12 
 
 
225 aa  209  4e-53  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1012  two component transcriptional regulator  48.5 
 
 
257 aa  208  5e-53  Synechococcus elongatus PCC 7942  Bacteria  normal  0.658807  normal 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  46.05 
 
 
239 aa  208  6e-53  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  48.2 
 
 
231 aa  208  6e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  46.05 
 
 
239 aa  208  6e-53  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
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