More than 300 homologs were found in PanDaTox collection
for query gene GYMC61_0785 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  100 
 
 
235 aa  473  1e-133  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  78.3 
 
 
234 aa  380  1e-104  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  72.8 
 
 
239 aa  353  2e-96  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  72.38 
 
 
239 aa  352  4e-96  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  72.38 
 
 
239 aa  352  4e-96  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  72.38 
 
 
239 aa  352  4e-96  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  72.38 
 
 
239 aa  352  4e-96  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  72.38 
 
 
239 aa  352  4e-96  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  72.38 
 
 
239 aa  352  4e-96  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  71.55 
 
 
239 aa  351  5e-96  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  71.55 
 
 
239 aa  351  5e-96  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  72.8 
 
 
239 aa  350  8e-96  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  71.85 
 
 
238 aa  349  3e-95  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  66.81 
 
 
234 aa  320  1.9999999999999998e-86  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  66.81 
 
 
234 aa  320  1.9999999999999998e-86  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  65.96 
 
 
236 aa  314  9e-85  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  57.27 
 
 
229 aa  256  2e-67  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  54.24 
 
 
235 aa  254  7e-67  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  54.27 
 
 
235 aa  251  6e-66  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  54.27 
 
 
235 aa  251  7e-66  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  54.27 
 
 
235 aa  251  7e-66  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  54.27 
 
 
235 aa  251  7e-66  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  55.17 
 
 
239 aa  249  2e-65  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  54.15 
 
 
232 aa  249  3e-65  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  55.22 
 
 
239 aa  248  4e-65  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  53.85 
 
 
235 aa  248  5e-65  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  53.62 
 
 
236 aa  248  8e-65  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  54.08 
 
 
233 aa  247  1e-64  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  53.88 
 
 
235 aa  247  1e-64  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  53.91 
 
 
235 aa  247  1e-64  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  54.08 
 
 
235 aa  246  3e-64  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  51.77 
 
 
230 aa  244  9e-64  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  53.22 
 
 
236 aa  242  3e-63  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  52.97 
 
 
237 aa  242  3e-63  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  54.19 
 
 
230 aa  239  2e-62  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  51.5 
 
 
233 aa  239  2.9999999999999997e-62  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  51.07 
 
 
233 aa  238  6.999999999999999e-62  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  51.07 
 
 
233 aa  238  6.999999999999999e-62  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  52.7 
 
 
230 aa  237  1e-61  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  50.42 
 
 
239 aa  237  1e-61  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  54.35 
 
 
232 aa  237  1e-61  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  50.42 
 
 
239 aa  237  1e-61  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  55.17 
 
 
234 aa  234  9e-61  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  50.66 
 
 
235 aa  231  7.000000000000001e-60  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  53.1 
 
 
230 aa  229  2e-59  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  47.7 
 
 
239 aa  229  2e-59  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  52.42 
 
 
237 aa  229  3e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  53.54 
 
 
237 aa  227  1e-58  Ammonifex degensii KC4  Bacteria  normal