Gene Cagg_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0243 
Symbol 
ID7267423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp305086 
End bp305793 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID643565112 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002461627 
Protein GI219847194 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0646165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG CGACGATTTT GGTGGTTGAT GATGAACAAC CGATTGTCGA TTTGGTAAGT 
AGTTACCTTA TCAATGAAGG GTTTATCGTA CATCGTGCGT TTGACGGGCC GAGTGCGTTG
GCTTTGGCAC GTAGTGTGAA ACCCGATCTC GTAATTCTCG ACATTATGCT GCCCGGTCTT
GATGGGATCG AGGTTTGTCG GCAATTGCAC CGGGAAACGA CCGTCTACGT GTTGATGTTA
ACGGCCCGCG CCGATGAGAT CGATAAGCTG ATCGGCCTGT CAGTAGGGGC CGATGATTAT
TTGACGAAGC CGTTTAGCCC GCGCGAACTG GTGGCACGGG TTAAAGCTAT TTTACGCCGT
AACCGTGCGG CCCGTGTGCT CGATGTTCAT CAACGCCCGG TTTTGCAATT TGCCGGTCTG
CTGATCGATC CCGAACGTCG GGAGGTGGAG CGTAATGGGA TACGAGTTGA TCTGACACCG
CGTGAATTTG ACCTGCTCTA TACGTTGGCG AGTTATCCGG GCCGGGTGTT TACCCGAGAA
GAGTTGCTGC AACGGGTATG GGGTCCCGAT TTTGCCGGTA TTGATCGAGT GGTTGATGTC
CATATCGGTA CGTTACGGCG CAAACTTGAT GATGACCAAC ACGGTACGCC GCTTGTGCAG
ACGGTGCGCG GCGTAGGGTA TAAGTTTGTC GGCGGCACAC GATCATGA
 
Protein sequence
MEAATILVVD DEQPIVDLVS SYLINEGFIV HRAFDGPSAL ALARSVKPDL VILDIMLPGL 
DGIEVCRQLH RETTVYVLML TARADEIDKL IGLSVGADDY LTKPFSPREL VARVKAILRR
NRAARVLDVH QRPVLQFAGL LIDPERREVE RNGIRVDLTP REFDLLYTLA SYPGRVFTRE
ELLQRVWGPD FAGIDRVVDV HIGTLRRKLD DDQHGTPLVQ TVRGVGYKFV GGTRS