| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0707 |
|---|
| Symbol | |
|---|
| ID | 4957100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 761844 |
|---|
| End bp | 762542 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640179881 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001112071 |
|---|
| Protein GI | 134298575 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAA TTCTTGTGGT TGAAGATGAA CAACCCATTC GCGAATTAAT CAAGTATAAC
CTTGAGCGAG AAGGCTTTCA AGTTATACAG GCGGCGAACG GAGATATTGC CCTAGACATG
GCCAAAAGCG AAGTTCCCGA TATTATTTTA CTGGATATTA TGTTGCCCGG GCAGGATGGA
CTGTCTGTAT GCCGCTATCT TCATCAAGAT GCTGCTACCC GTTCCATTCC TATTATTATG
CTTAGTGCCA GAGGTGAAGA GTTGGATAAG GTTTTAGGCC TGGAGATGGG GGCCGATGAT
TATATTACCA AGCCCTTTAG CCCACGGGAA CTCATTGCAC GTATAAAGGC ACGCCTAAGG
CGACAAACTG TGGAAAATCA AGTTTTAGAA GATGCAGGTA GAATTACGGT AGGTAAGCTG
GTGATTGATC AAGACCGCTT TGTTGTTTCG TATAACGGGA TTAAACAGGA TCTTACACCA
AAGGAGTTTG AATTATTGCG GTATCTGGCT AGGAACCCGG GCAAGGTGTT TACCAGGGAT
TTTCTACTGG AGCAAATTTG GGGCTATGAT TTCTCTGGGG ATTCAAGAAC GGTGGATGTT
CACATCCGCC ACATAAGGCA GAAGCTAGAG CAACTTCCCG ATGCACCTCA GTTTATTGAA
ACTGTACGTG GAGTAGGCTA TCGGTTCAAG GAGGTATAG
|
|---|
| Protein sequence | MPKILVVEDE QPIRELIKYN LEREGFQVIQ AANGDIALDM AKSEVPDIIL LDIMLPGQDG
LSVCRYLHQD AATRSIPIIM LSARGEELDK VLGLEMGADD YITKPFSPRE LIARIKARLR
RQTVENQVLE DAGRITVGKL VIDQDRFVVS YNGIKQDLTP KEFELLRYLA RNPGKVFTRD
FLLEQIWGYD FSGDSRTVDV HIRHIRQKLE QLPDAPQFIE TVRGVGYRFK EV
|
|---|
| |