Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1394 |
Symbol | |
ID | 4809055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1703851 |
End bp | 1704561 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106818 |
Product | two component transcriptional regulator |
Protein accession | YP_001037819 |
Protein GI | 125973909 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000024965 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAA AGTTAATTTA TATAGTGGAA GACGAAAAGC ATATTCAGGA ATTGCTAAGG TTTAATCTTG AGGAGAACGG CTATGAGGTG GAGTGCTTTG AAGACGGTGA GACCATGTTT GAGGTTGTGG AGAGGAAAAA GCCGGACCTC TTCGTTCTGG ATATAATGCT TCCGGGTGTG GACGGGTTTG AAATTTGCAA AAAAATCAAG GAGAATTATG ACTTAAAGAA AATACCCATA ATTATGCTTA CTGCCAAAAA TGATGAGCTT GACAGGGTTT TGGGGCTTGA GCTTGGCGCG GACGATTATA TTTCAAAACC CTTTAGTGTC CGGGAATTTG TAGCAAGGGT AAAGGTTGCC TTCAGAAGGC AGGCGGATTC TTTTGAAAAC AGTCCTAAAA GAGTTAATGT CGGAAGAATA ACCATAGATT TTGAAAGGCG CGAGGTTTAC AAGGACAATC AGATAATTGA AATGACCTTT AAGGAGTTTG AGCTTTTAAA ACTGTTGATT ATGAACAGAG GCAAAGTTCT TTCGCGGGAC ATGCTGCTTC AGAAAATCTG GGGATTTGAC TTTTTTGGAG AAACAAGGAC CGTGGATGTG CACATAAGAT ATTTGAGACA AAAAATTGAA GATGACGACA ACAATCCCGT ATATATTGAA ACCGTAAGAT GTATAGGTTA TCGGTTTAGT GATAAAGAGG TTCGGGAGTA A
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Protein sequence | MAKKLIYIVE DEKHIQELLR FNLEENGYEV ECFEDGETMF EVVERKKPDL FVLDIMLPGV DGFEICKKIK ENYDLKKIPI IMLTAKNDEL DRVLGLELGA DDYISKPFSV REFVARVKVA FRRQADSFEN SPKRVNVGRI TIDFERREVY KDNQIIEMTF KEFELLKLLI MNRGKVLSRD MLLQKIWGFD FFGETRTVDV HIRYLRQKIE DDDNNPVYIE TVRCIGYRFS DKEVRE
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