More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6145 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6145  two component transcriptional regulator  100 
 
 
228 aa  447  1e-125  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  92.04 
 
 
226 aa  395  1e-109  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  79.11 
 
 
226 aa  363  1e-99  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  78.32 
 
 
226 aa  362  2e-99  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  78.76 
 
 
226 aa  361  5.0000000000000005e-99  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  81.42 
 
 
231 aa  361  6e-99  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  78.32 
 
 
229 aa  360  1e-98  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  79.11 
 
 
229 aa  359  2e-98  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  79.2 
 
 
226 aa  358  4e-98  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  78.76 
 
 
230 aa  357  8e-98  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  79.56 
 
 
226 aa  357  9e-98  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  77.33 
 
 
226 aa  355  3.9999999999999996e-97  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  76.44 
 
 
226 aa  353  1e-96  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  75.33 
 
 
228 aa  350  7e-96  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  75.33 
 
 
228 aa  350  7e-96  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  75.33 
 
 
228 aa  350  7e-96  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  75.66 
 
 
227 aa  348  3e-95  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  76 
 
 
226 aa  348  5e-95  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  76.44 
 
 
225 aa  348  5e-95  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  74.01 
 
 
228 aa  348  6e-95  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  74.01 
 
 
228 aa  347  1e-94  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  74.24 
 
 
229 aa  343  1e-93  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  74.67 
 
 
229 aa  342  4e-93  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  71.81 
 
 
228 aa  336  1.9999999999999998e-91  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0337  two component transcriptional regulator  79.3 
 
 
227 aa  336  1.9999999999999998e-91  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0404  two component transcriptional regulator  77.53 
 
 
227 aa  327  8e-89  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00316128 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  73.13 
 
 
228 aa  327  1.0000000000000001e-88  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  69.33 
 
 
226 aa  326  2.0000000000000001e-88  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0896  two component transcriptional regulator, winged helix family  77.78 
 
 
226 aa  323  1e-87  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232326  hitchhiker  0.00518822 
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  72.12 
 
 
229 aa  322  4e-87  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  68 
 
 
226 aa  313  1.9999999999999998e-84  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  67.52 
 
 
237 aa  309  2.9999999999999997e-83  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_012669  Bcav_0771  two component transcriptional regulator, winged helix family  71.3 
 
 
233 aa  296  2e-79  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.204872  normal  0.13372 
 
 
-
 
NC_013521  Sked_31880  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  70.61 
 
 
231 aa  292  2e-78  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2969  two component transcriptional regulator, winged helix family  65.98 
 
 
246 aa  290  1e-77  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0657  two component transcriptional regulator, winged helix family  70.31 
 
 
235 aa  289  2e-77  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.118815  hitchhiker  0.000311431 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  59.57 
 
 
234 aa  278  5e-74  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  59.03 
 
 
242 aa  252  3e-66  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  50.44 
 
 
229 aa  243  1.9999999999999999e-63  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  49.55 
 
 
236 aa  231  1e-59  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  50 
 
 
235 aa  228  4e-59  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  48.48 
 
 
230 aa  226  3e-58  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  47.16 
 
 
256 aa  224  1e-57  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  47.84 
 
 
235 aa  224  1e-57  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  53.98 
 
 
225 aa  223  2e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  46.72 
 
 
230 aa  221  7e-57  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  50.44 
 
 
236 aa  221  9.999999999999999e-57  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  48.46 
 
 
235 aa  219  1.9999999999999999e-56  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  48.46 
 
 
235 aa  219  1.9999999999999999e-56  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  48.46 
 
 
235 aa  219  1.9999999999999999e-56  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  44.89 
 
 
232 aa  219  1.9999999999999999e-56  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  53.1 
 
 
225 aa  219  3e-56  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  48.88 
 
 
237 aa  219  3e-56  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  48.46 
 
 
235 aa  219  3e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  50.67 
 
 
228 aa  219  3.9999999999999997e-56  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  46.72 
 
 
238 aa  219  3.9999999999999997e-56  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  49.33 
 
 
237 aa  218  5e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  50.67 
 
 
237 aa  218  5e-56  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  48.46 
 
 
235 aa  218  6e-56  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  48.46 
 
 
235 aa  218  6e-56  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  48.46 
 
 
235 aa  218  6e-56  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  48.46 
 
 
235 aa  218  6e-56  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  48.46 
 
 
235 aa  218  6e-56  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  48.46 
 
 
235 aa  218  6e-56  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  48.26 
 
 
232 aa  218  6e-56  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  48.46 
 
 
235 aa  218  6e-56  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50.67 
 
 
240 aa  217  1e-55  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  51.13 
 
 
230 aa  217  1e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  45.18 
 
 
230 aa  217  1e-55  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  52.61 
 
 
239 aa  216  2e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  49.35 
 
 
250 aa  215  4e-55  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  45.69 
 
 
239 aa  215  4e-55  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  48.66 
 
 
235 aa  215  4e-55  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  49.78 
 
 
236 aa  215  5e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_007604  Synpcc7942_1012  two component transcriptional regulator  47.21 
 
 
257 aa  215  5e-55  Synechococcus elongatus PCC 7942  Bacteria  normal  0.658807  normal 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  50.67 
 
 
236 aa  215  5.9999999999999996e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  42.79 
 
 
236 aa  214  7e-55  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  45.74 
 
 
230 aa  214  9.999999999999999e-55  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  48.5 
 
 
237 aa  213  1.9999999999999998e-54  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  52.21 
 
 
233 aa  213  2.9999999999999995e-54  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_013947  Snas_0721  two component transcriptional regulator, winged helix family  50.66 
 
 
233 aa  212  3.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.811558  normal 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  50.44 
 
 
226 aa  211  5.999999999999999e-54  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  47.84 
 
 
250 aa  211  7.999999999999999e-54  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_011726  PCC8801_3460  two component transcriptional regulator, winged helix family  46.52 
 
 
250 aa  211  7.999999999999999e-54  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  44.83 
 
 
239 aa  211  9e-54  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  49.12 
 
 
235 aa  211  9e-54  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  44.83 
 
 
239 aa  211  9e-54  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013161  Cyan8802_2657  two component transcriptional regulator, winged helix family  46.52 
 
 
250 aa  211  1e-53  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.350713 
 
 
-
 
NC_007516  Syncc9605_1618  two component transcriptional regulator  46.98 
 
 
254 aa  210  1e-53  Synechococcus sp. CC9605  Bacteria  normal  normal  0.218753 
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  49.12 
 
 
233 aa  210  1e-53  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  46.26 
 
 
230 aa  210  1e-53  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  47.09 
 
 
227 aa  210  2e-53  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  47.32 
 
 
233 aa  210  2e-53  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  46.52 
 
 
236 aa  209  2e-53  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  43.53 
 
 
238 aa  210  2e-53  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  45.61 
 
 
228 aa  210  2e-53  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  45.33 
 
 
232 aa  209  2e-53  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  49.55 
 
 
231 aa  209  3e-53  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  48.44 
 
 
226 aa  209  3e-53  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  44.4 
 
 
239 aa  209  3e-53  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
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