Gene Franean1_6145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6145 
Symbol 
ID5674466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7476992 
End bp7477678 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID641244997 
Producttwo component transcriptional regulator 
Protein accessionYP_001510395 
Protein GI158317887 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.788201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTGA CCAGGCTGCT CGTGGTCGAG GACGAGGAGT CCTTCTCCGA TGCGTTGTCG 
TTCATGTTGG AACGCGAGGG GTTCGAGGTC GCCGTCGTCG GTGACGGGCC CAGCGCGCTG
GCCGAGTTCG ACCGGCACGG TGCCGACCTG ATCCTGCTCG ACCTCATGCT CCCCGGCCTG
TCCGGGACGG AGGTCTGTCG CACGCTGCGT GCCCGCTCGA CCGTGCCTGT GATCATGCTC
ACCGCCCGGG ACAGCGAGAT CGACAAGGTG GTCGGCCTCG AGCTGGGCGC CGACGACTAC
GTGACGAAGC CGTTCTCGGC CCGCGAGCTC GTCGCCCGGA TCCGCGCCGT CCTGCGCCGC
CGGGTGGAGA CCGAGGAGGT GTCCGACGCC ACCCTGGAGG TCGGCCGGGT GCGGATGGAC
GTCGAGCGGC ATGTCGTCAC CGTCGACGGC AGCCAGGTCG CGCTGCCGCT CAAGGAGTTC
GAGCTGCTGG AGATGTTCCT GCGCAACGCG GGCCGGGTGC TCACCCGCGG CCAGCTGATC
GACCGGGTCT GGGGGTCGGA CTACGTCGGC GACACCAAGA CGCTCGACGT CCATGTGAAG
CGCCTGCGCA CCAAGATCGA GGCCGAGCCG GGGGCGCCGC GGCACCTGGT GACGGTGCGT
GGTCTGGGTT ACAAGTTCGA GCCCTGA
 
Protein sequence
MTVTRLLVVE DEESFSDALS FMLEREGFEV AVVGDGPSAL AEFDRHGADL ILLDLMLPGL 
SGTEVCRTLR ARSTVPVIML TARDSEIDKV VGLELGADDY VTKPFSAREL VARIRAVLRR
RVETEEVSDA TLEVGRVRMD VERHVVTVDG SQVALPLKEF ELLEMFLRNA GRVLTRGQLI
DRVWGSDYVG DTKTLDVHVK RLRTKIEAEP GAPRHLVTVR GLGYKFEP