Gene Tpau_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0654 
Symbol 
ID9154790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp671719 
End bp672408 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003645630 
Protein GI296138387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.200991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACACG TACTGATTGT CGAAGACGAG GAGTCGCTGG CCGACCCTCT GGCGTTCCTG 
CTCCGCAAGG AGGGGTTCGA GACCACCGTG GTCACGGACG GCGCCGAAGC TCTCCGGCAT 
TTCGACTCCG CCGGTGCCGA TATCGTGCTG CTCGATCTCA TGCTCCCGGG CATGAGCGGC 
ACCGACGTCT GCAAGCAGTT GCGCGCCCGC TCGTCGGTGC CGGTCATCAT GGTGACTGCC 
CGCGACAGCG AGATCGACAA GGTCGTCGGC CTGGAGCTGG GAGCGGACGA CTACGTCACC 
AAGCCCTACT CCGCCCGGGA GCTGATCGCC CGGATCCGGG CGGTGCTGCG GCGCGGTGCG 
GATACCGCCG GCGGCGAGGG CCTCGACGAC GGGGTGCTCG AGGGCGGCCC GGTGCGGATG 
GACGTCGAGC GGCACGTGGT CACCGTGGCC GGCGAGGCCG TCACCTTGCC GCTCAAGGAG 
TTCGACCTGC TCGAGTACCT GCTGCGCAAC AGCGGCCGGG TACTCACCCG CGGACAGCTC 
ATCGACCGCG TCTGGGGTGC CGACTACGTG GGCGATACGA AGACCCTCGA TGTGCACGTC 
AAACGCCTGC GCAGCAAGAT CGAGGCCGAT CCGGCCAACC CGAAGCACCT GGTCACCGTT 
CGCGGACTGG GCTACAAGCT CGAGCCCTAG
 
Protein sequence
MTHVLIVEDE ESLADPLAFL LRKEGFETTV VTDGAEALRH FDSAGADIVL LDLMLPGMSG 
TDVCKQLRAR SSVPVIMVTA RDSEIDKVVG LELGADDYVT KPYSARELIA RIRAVLRRGA 
DTAGGEGLDD GVLEGGPVRM DVERHVVTVA GEAVTLPLKE FDLLEYLLRN SGRVLTRGQL 
IDRVWGADYV GDTKTLDVHV KRLRSKIEAD PANPKHLVTV RGLGYKLEP