| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1349 |
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| Symbol | |
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| ID | 8414238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1520802 |
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| End bp | 1521515 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022950 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003180364 |
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| Protein GI | 257785147 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.421984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG ACGAGAAGAA AATTCTGATT GTCGAAGATG AGAAAGTCAT CCGTGACGCT
GTCTCAGCAT ATCTTGAGCG CGAAAATTAC GTTGTTAAGG GTGTTGGCGA TGGTCAGAGT
GCAGTTGAGG AGTTTGAGAA ACATGCATTT GACCTGGTCA TCCTTGATCT GATGCTTCCA
AAACTTTCTG GAGAGCGCGT TTGTCGTGCA ATCAGAGATA CTTCTAATGT GCCTATCATT
ATGCTTACCG CAAAAGGTGA GGTAGAGGAT AGGATTATCG GTCTTGAACT TGGTGCTGAT
GATTATCTTG TTAAGCCCTT CTCACCTCGT GAGTTAGTGG CGCGTGTCCG TGCGCTGTTC
CGCCGCACTT ATTCAGAGCC AGATACTGCT GTTGACGTGC TTGATTACGG CACTCTTACC
ATTGATATTT CCGGTCACAA GATTCTCATT AACAATGAGG AAGTTGACCT TACTGCTTCA
GAGTTTAAGC TGCTTACAAC CCTTGCTCGT TATCCTGGCC GTGTATATAC GCGCATGGAG
CTTGTCGAGA AGGTTTTGGG CTATGATTTT GAAGGTTACG AGCGCACCAT TGATTCGCAT
GTTAAGAACT TGCGTGCAAA GTTAGGTGAT GACCCTCGTA ATCCTCGCTG GCTGTTCACT
GTTCACGGTG TTGGCTATCG CTTCGAGGCT GGCAACGCTA GCCATGAGGC TTAA
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| Protein sequence | MASDEKKILI VEDEKVIRDA VSAYLERENY VVKGVGDGQS AVEEFEKHAF DLVILDLMLP
KLSGERVCRA IRDTSNVPII MLTAKGEVED RIIGLELGAD DYLVKPFSPR ELVARVRALF
RRTYSEPDTA VDVLDYGTLT IDISGHKILI NNEEVDLTAS EFKLLTTLAR YPGRVYTRME
LVEKVLGYDF EGYERTIDSH VKNLRAKLGD DPRNPRWLFT VHGVGYRFEA GNASHEA
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