More than 300 homologs were found in PanDaTox collection
for query gene TRQ2_1174 on replicon NC_010483
Organism: Thermotoga sp. RQ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010483  TRQ2_1174  two component transcriptional regulator  100 
 
 
239 aa  469  1.0000000000000001e-131  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  100 
 
 
239 aa  469  1.0000000000000001e-131  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  79.5 
 
 
239 aa  397  1e-109  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  77.41 
 
 
239 aa  383  1e-105  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  71.97 
 
 
242 aa  347  7e-95  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  57.39 
 
 
229 aa  261  4.999999999999999e-69  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  54.82 
 
 
232 aa  257  1e-67  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  54.74 
 
 
239 aa  254  8e-67  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  52.52 
 
 
235 aa  249  2e-65  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  52.52 
 
 
235 aa  249  3e-65  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  53.48 
 
 
231 aa  249  3e-65  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  52.52 
 
 
235 aa  249  3e-65  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  52.52 
 
 
235 aa  249  3e-65  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  54.15 
 
 
230 aa  248  7e-65  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  52.1 
 
 
235 aa  247  1e-64  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  52.1 
 
 
235 aa  247  1e-64  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  52.1 
 
 
235 aa  247  1e-64  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  52.1 
 
 
235 aa  247  1e-64  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  52.1 
 
 
235 aa  247  1e-64  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  52.1 
 
 
235 aa  247  1e-64  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  52.1 
 
 
235 aa  247  1e-64  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  54.24 
 
 
235 aa  246  2e-64  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  53.04 
 
 
232 aa  246  3e-64  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  57.02 
 
 
227 aa  244  6e-64  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  54.2 
 
 
237 aa  243  1.9999999999999999e-63  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  53.14 
 
 
236 aa  243  1.9999999999999999e-63  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  54.89 
 
 
238 aa  242  3.9999999999999997e-63  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  51.72 
 
 
230 aa  242  5e-63  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  53.91 
 
 
226 aa  239  2e-62  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  50.86 
 
 
235 aa  239  2.9999999999999997e-62  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  51.72 
 
 
233 aa  238  8e-62  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  50.42 
 
 
235 aa  237  1e-61  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  52.56 
 
 
236 aa  237  1e-61  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  51.69 
 
 
234 aa  235  4e-61  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  51.5 
 
 
233 aa  235  4e-61  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  53.25 
 
 
232 aa  234  1.0000000000000001e-60  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  50.85 
 
 
235 aa  234  1.0000000000000001e-60  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  52.38 
 
 
229 aa  233  2.0000000000000002e-60  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  52.63 
 
 
233 aa  232  3e-60  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  52.63 
 
 
233 aa  232  3e-60  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  49.78 
 
 
226 aa  233  3e-60  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  52.63 
 
 
233 aa  232  3e-60  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  50.42 
 
 
235 aa  233  3e-60  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  51.28 
 
 
256 aa  232  4.0000000000000004e-60  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  51.93 
 
 
238 aa  231  5e-60  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  52.77 
 
 
235 aa  231  5e-60  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  50.43 
 
 
230 aa  230  1e-59  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1073  putative response regulator  47.23 
 
 
234 aa  230  1e-59  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  52.16 
 
 
231 aa  230  1e-59  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  51.27 
 
 
239 aa  230  2e-59  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  51.27 
 
 
239 aa  229  3e-59  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  51.27 
 
 
239 aa  229  3e-59  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  51.27 
 
 
239 aa  229  3e-59  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  51.27 
 
 
239 aa  229  3e-59  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  51.27 
 
 
239 aa  229  3e-59  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  52.12 
 
 
239 aa  229  3e-59  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  51.27 
 
 
239 aa  229  3e-59  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  52.12 
 
 
239 aa  229  3e-59  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  52.12 
 
 
239 aa  229  4e-59  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.56 
 
 
229 aa  229  4e-59  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  53.88 
 
 
231 aa  229  4e-59  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  51.27 
 
 
232 aa  228  8e-59  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  54.74 
 
 
234 aa  227  1e-58  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  50 
 
 
229 aa  227  1e-58  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  51.3 
 
 
228 aa  227  1e-58  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  51.09 
 
 
226 aa  226  2e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  50.43 
 
 
230 aa  226  2e-58  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  50.43 
 
 
236 aa  225  4e-58  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  47.88 
 
 
237 aa  224  7e-58  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  53.45 
 
 
231 aa  224  9e-58  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  50.43 
 
 
230 aa  224  1e-57  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  50.44 
 
 
230 aa  224  1e-57  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  48.29 
 
 
229 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  49.13 
 
 
237 aa  223  2e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  45.18 
 
 
242 aa  222  4e-57  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  50.22 
 
 
229 aa  222  4e-57  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00709514 
 
 
-
 
NC_009972  Haur_4036  two component transcriptional regulator  50.64 
 
 
248 aa  221  6e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  46.52 
 
 
234 aa  221  6e-57  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  49.78 
 
 
228 aa  221  8e-57  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  49.12 
 
 
231 aa  220  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  50.43 
 
 
228 aa  220  1.9999999999999999e-56  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  47.81 
 
 
232 aa  220  1.9999999999999999e-56  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  50.88 
 
 
223 aa  220  1.9999999999999999e-56  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_010512  Bcenmc03_6757  two component transcriptional regulator  46.61 
 
 
239 aa  218  6e-56  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.250889  normal 
 
 
-
 
NC_008060  Bcen_1561  two component transcriptional regulator  46.61 
 
 
239 aa  218  6e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.932075  n/a   
 
 
-
 
NC_008544  Bcen2424_6268  two component transcriptional regulator  46.61 
 
 
239 aa  218  6e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  0.350192  normal  0.482642 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  51.1 
 
 
236 aa  218  7.999999999999999e-56  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  49.35 
 
 
237 aa  218  7.999999999999999e-56  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6809  two component transcriptional regulator  46.61 
 
 
277 aa  218  1e-55  Burkholderia sp. 383  Bacteria  normal  normal  0.867301 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  45.18 
 
 
228 aa  217  1e-55  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0439  two component transcriptional regulator  47.58 
 
 
225 aa  217  2e-55  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000223011  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  50.85 
 
 
239 aa  216  2e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3071  two component transcriptional regulator  44.07 
 
 
238 aa  216  2e-55  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.000985444  normal 
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  48.47 
 
 
245 aa  216  2.9999999999999998e-55  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0926269 
 
 
-
 
NC_007948  Bpro_0543  two component transcriptional regulator  46.32 
 
 
241 aa  216  2.9999999999999998e-55  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2988  two component transcriptional regulator, winged helix family  45.92 
 
 
242 aa  216  2.9999999999999998e-55  Variovorax paradoxus S110  Bacteria  normal  0.410423  n/a   
 
 
-
 
NC_010623  Bphy_5426  two component transcriptional regulator  47.01 
 
 
251 aa  216  2.9999999999999998e-55  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4496  two component transcriptional regulator, winged helix family  46.58 
 
 
245 aa  216  4e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0295  two component transcriptional regulator, winged helix family  46.25 
 
 
242 aa  216  4e-55  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0307  two component transcriptional regulator, winged helix family  46.25 
 
 
242 aa  216  4e-55  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
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