Gene Bcen2424_6268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6268 
Symbol 
ID4454071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp446614 
End bp447333 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID639698333 
Producttwo component transcriptional regulator 
Protein accessionYP_839893 
Protein GI116686646 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.350192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.482642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC CGAAACGCAT CCTGATCGTC GAGGACGACG CCGACATCGC CGACGTGCTG 
AGCCTGCACC TGCGCGACGA GCGCTACGAG GTCGTGCACA GCGCGGACGG CGCCGAAGGG
TTGCGCCTGC TCGAACAGGG CAACTGGGAC GCGCTGATCC TCGACCTGAT GCTGCCGGGC
GTCGACGGCC TCGAAATCTG CCGGCGGGCG CGGGCGATGA CGCGCTATAC GCCGATCATC
ATCACGAGCG CGCGGTCGAG CGAGGTGCAT CGAATCCTCG GCCTCGAACT CGGCGCCGAC
GACTACCTCG CGAAACCGTT CTCGGTGCTC GAACTTGTCG CGCGCGTGAA GGCGCTGCTG
CGGCGCGTCG ATGCGCTCGC ACGCGATTCG CGGATCGACG CGGGCACGCT CGACGTCGCG
GGGCTGGCGA TCGATCCGAT CGCACGCGAG GCGAGCGTCG ACGGCGCACG CCTCGACCTG
ACGCCGCGCG AATTCGACCT GCTGTATTTC TTCGCGCGGC ACCCAGGCAA GGTGTTCTCG
CGGATGGACC TGCTGAACGC TGTGTGGGGC TATCAGCACG AAGGCTACGA ACATACGGTC
AACACCCACA TCAACCGGCT GCGCGCGAAG ATCGAGGCCG ATCCGGCCGA GCCGGTGCGC
ATCCTCACCG TGTGGGGGCG CGGCTACAAG CTCGCCGCGC CGGGCCAGCG GGACGCGTGA
 
Protein sequence
MDQPKRILIV EDDADIADVL SLHLRDERYE VVHSADGAEG LRLLEQGNWD ALILDLMLPG 
VDGLEICRRA RAMTRYTPII ITSARSSEVH RILGLELGAD DYLAKPFSVL ELVARVKALL
RRVDALARDS RIDAGTLDVA GLAIDPIARE ASVDGARLDL TPREFDLLYF FARHPGKVFS
RMDLLNAVWG YQHEGYEHTV NTHINRLRAK IEADPAEPVR ILTVWGRGYK LAAPGQRDA