Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0609 |
Symbol | |
ID | 4206609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 728215 |
End bp | 728910 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565169 |
Product | DNA-binding response regulator |
Protein accession | YP_697936 |
Protein GI | 110801877 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000282114 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA AAAAAGTCCT AATAGTAGAT GATGAGGAAC ATATTAGAGA ACTTATAAAA TTTAACTTAA AAAAAGAGGG ATATGATATA GAGGTTGCTG TTAATGGAAC TGAAGCTCTA AATATTATAA GAGAAATTAA GTTTGATTTA ATACTTTTAG ATTTAATGCT TCCAGAAATA GATGGTTTAG AAGTATGCAA AGAAATTAGA AGAAATGAAG AAACTTCAGA TATTCCAGTA ATGATGATTA CAGCAAAGGG GGAAGAGTTT GATAAAGTAT TAGGCTTAGA ACTTGGAGCA GATGATTATA TAACAAAGCC ATTTTCAATA AGAGAACTTA TGGCTAGAGT AAAGGCTTTA CTTAGAAGAA GTAATTTTAA AAAAGAAGAA AATATAATTA AATTTGGTGA TGTAGTAGTT AATTTTAAAA CAAGAGAAGT AATAAAAGGA ACTCAAAATG TAGAATTAAC ATTAAAGGAG TTTGAATTAT TAAAGCTTCT TATAAAGAAT AAGGACAATA TATTAACTAG AGAGCTTTTG CTTGATAAAA TTTGGGGATA TGAATACATA GGGGAAACAA GAACAGTAGA TGTTCATATT AGACATTTAC GTAAAAAGAT TGAAAGTGAT GATAAAAATC CTCAATATAT TCAAACTATA AGAGGAGTTG GGTATAAGTT TACAAGCAAT GAATAA
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Protein sequence | MTNKKVLIVD DEEHIRELIK FNLKKEGYDI EVAVNGTEAL NIIREIKFDL ILLDLMLPEI DGLEVCKEIR RNEETSDIPV MMITAKGEEF DKVLGLELGA DDYITKPFSI RELMARVKAL LRRSNFKKEE NIIKFGDVVV NFKTREVIKG TQNVELTLKE FELLKLLIKN KDNILTRELL LDKIWGYEYI GETRTVDVHI RHLRKKIESD DKNPQYIQTI RGVGYKFTSN E
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