More than 300 homologs were found in PanDaTox collection
for query gene Swol_0951 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_0951  response regulator receiver protein  100 
 
 
239 aa  487  1e-137  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  57.33 
 
 
235 aa  267  1e-70  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  58.7 
 
 
232 aa  266  2e-70  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  57.58 
 
 
231 aa  263  1e-69  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  58.26 
 
 
226 aa  261  6e-69  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  55.41 
 
 
230 aa  256  3e-67  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_010718  Nther_0984  two component transcriptional regulator, winged helix family  53.91 
 
 
246 aa  255  5e-67  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.0723779 
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  54.74 
 
 
239 aa  254  8e-67  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  54.74 
 
 
239 aa  254  8e-67  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  52.99 
 
 
238 aa  249  2e-65  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  55.22 
 
 
235 aa  248  4e-65  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  51.91 
 
 
239 aa  248  5e-65  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  52.34 
 
 
239 aa  248  5e-65  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  52.34 
 
 
239 aa  248  5e-65  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  53.81 
 
 
231 aa  248  6e-65  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  51.91 
 
 
239 aa  248  7e-65  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  51.91 
 
 
239 aa  248  7e-65  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  51.91 
 
 
239 aa  248  7e-65  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  51.91 
 
 
239 aa  248  7e-65  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  51.91 
 
 
239 aa  248  7e-65  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  51.91 
 
 
239 aa  248  7e-65  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  51.91 
 
 
239 aa  247  2e-64  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  53.39 
 
 
231 aa  246  3e-64  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  52.77 
 
 
234 aa  245  4.9999999999999997e-64  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  51.46 
 
 
238 aa  245  4.9999999999999997e-64  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  52.59 
 
 
239 aa  245  4.9999999999999997e-64  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  50.86 
 
 
239 aa  243  9.999999999999999e-64  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  52.61 
 
 
234 aa  241  6e-63  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  50.42 
 
 
236 aa  241  6e-63  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  52.61 
 
 
234 aa  241  6e-63  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  51.9 
 
 
236 aa  240  2e-62  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  50 
 
 
230 aa  240  2e-62  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  54.55 
 
 
232 aa  240  2e-62  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  52.84 
 
 
229 aa  239  2.9999999999999997e-62  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  55.02 
 
 
227 aa  239  2.9999999999999997e-62  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  53.42 
 
 
232 aa  237  1e-61  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  53.3 
 
 
235 aa  235  4e-61  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  51.95 
 
 
236 aa  235  4e-61  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  52.17 
 
 
235 aa  234  6e-61  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  51.54 
 
 
233 aa  234  7e-61  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  52.17 
 
 
235 aa  234  8e-61  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  51.74 
 
 
235 aa  233  1.0000000000000001e-60  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  52.17 
 
 
235 aa  234  1.0000000000000001e-60  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  53.74 
 
 
234 aa  233  2.0000000000000002e-60  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  51.74 
 
 
235 aa  231  6e-60  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  51.97 
 
 
234 aa  231  7.000000000000001e-60  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  51.1 
 
 
233 aa  231  8.000000000000001e-60  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  52.19 
 
 
223 aa  231  9e-60  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  51.53 
 
 
231 aa  230  1e-59  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  50.43 
 
 
235 aa  229  2e-59  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  51.05 
 
 
237 aa  228  7e-59  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  52.86 
 
 
235 aa  228  7e-59  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  50.66 
 
 
233 aa  228  9e-59  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  50.66 
 
 
233 aa  228  9e-59  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  46.35 
 
 
234 aa  227  1e-58  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  49.78 
 
 
236 aa  227  1e-58  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  49.14 
 
 
233 aa  225  4e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  50.21 
 
 
235 aa  225  6e-58  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  50.43 
 
 
235 aa  225  6e-58  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  48.28 
 
 
227 aa  225  6e-58  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  48.32 
 
 
239 aa  223  2e-57  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  48.32 
 
 
250 aa  223  2e-57  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  50 
 
 
229 aa  223  2e-57  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  49.36 
 
 
232 aa  222  3e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  46.98 
 
 
233 aa  222  4e-57  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  50.64 
 
 
236 aa  221  6e-57  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  48.72 
 
 
228 aa  221  6e-57  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  49.16 
 
 
237 aa  221  7e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  49.57 
 
 
227 aa  221  7e-57  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  50 
 
 
230 aa  220  1.9999999999999999e-56  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  50.22 
 
 
237 aa  219  3e-56  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  50.22 
 
 
228 aa  219  3e-56  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  50.22 
 
 
225 aa  219  3.9999999999999997e-56  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  48.91 
 
 
236 aa  219  3.9999999999999997e-56  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  47.06 
 
 
250 aa  219  3.9999999999999997e-56  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  48.51 
 
 
229 aa  218  7e-56  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  47.86 
 
 
231 aa  217  1e-55  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  48.92 
 
 
237 aa  216  2e-55  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  44.64 
 
 
242 aa  216  2.9999999999999998e-55  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  49.79 
 
 
227 aa  216  2.9999999999999998e-55  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  48.91 
 
 
231 aa  215  5.9999999999999996e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  46.58 
 
 
230 aa  213  1.9999999999999998e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  44.49 
 
 
236 aa  213  2.9999999999999995e-54  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_011830  Dhaf_1673  two component transcriptional regulator, winged helix family  48.51 
 
 
233 aa  211  5.999999999999999e-54  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_3460  two component transcriptional regulator, winged helix family  45.15 
 
 
250 aa  211  7e-54  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2657  two component transcriptional regulator, winged helix family  45.15 
 
 
250 aa  211  7e-54  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.350713 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  48.91 
 
 
225 aa  211  9e-54  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  50.22 
 
 
237 aa  210  2e-53  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  48.03 
 
 
229 aa  209  2e-53  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  43.16 
 
 
242 aa  210  2e-53  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  47.58 
 
 
231 aa  210  2e-53  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  46.12 
 
 
227 aa  210  2e-53  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  46.61 
 
 
230 aa  209  3e-53  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  46.12 
 
 
232 aa  209  3e-53  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
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