| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1102 |
|---|
| Symbol | |
|---|
| ID | 2688572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1187640 |
|---|
| End bp | 1188317 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637125771 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | NP_952155 |
|---|
| Protein GI | 39996204 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGA TACTTATCAT CGAAGACGAG CGCGACCTGG CCGATCTGGT GGCCTTCAAC
CTTGAAAAAG AAGGGTATCG GACCCTCACG GCACTGGATG GCGCGAACGG CCTGGAATTG
GCCCGCAGCC AGCCCCCCGA CCTGATCCTG CTGGACCTGA TGCTGCCGGG AATGATGGGG
ATGGAGGTCT GCAAAATCCT CAAGAAGTCG GAAAAGACCG CCCATATCCC GGTCATCATG
CTGACGGCAC GCGGCGAGGA GATCGACCGT GTGGTCGGCT TCGAGGTCGG GGCCGACGAC
TACGTGGTAA AACCCTTCTC TACCCGCGAG TTGCTGCTCA GGGTGAAAGC GGTGCTGCGC
CGCTCCCTCC CCGACAAGCC GGAAGGAAAG GTCATCAATG TCGGGCCGGT GACGATCGAT
ACGGAGCGTC ACATGGTGGC CGTGGAGGGA GATGATGTCA CCCTGACCAC GACCGAGTTC
AAACTTCTGC TGAACCTTGC CGAGCGGCTC GGTCGGGTCC AGAGCCGCGA CCTCCTTCTC
AAAAACGTGT GGGGATATAA TTACGTGGGA GACACCCGCA CGGTGGATAC TCATATCACC
CGCCTGCGGA CGAAGCTGGG ACAGGCCGGA GAGCTGATCA AGACCGTCCG CGGCTTCGGC
TACAAGATGG AGGAATAG
|
|---|
| Protein sequence | MKTILIIEDE RDLADLVAFN LEKEGYRTLT ALDGANGLEL ARSQPPDLIL LDLMLPGMMG
MEVCKILKKS EKTAHIPVIM LTARGEEIDR VVGFEVGADD YVVKPFSTRE LLLRVKAVLR
RSLPDKPEGK VINVGPVTID TERHMVAVEG DDVTLTTTEF KLLLNLAERL GRVQSRDLLL
KNVWGYNYVG DTRTVDTHIT RLRTKLGQAG ELIKTVRGFG YKMEE
|
|---|
| |