More than 300 homologs were found in PanDaTox collection
for query gene Sfum_2892 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_2892  two component transcriptional regulator  100 
 
 
227 aa  453  1.0000000000000001e-126  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  71.24 
 
 
227 aa  332  3e-90  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  67.11 
 
 
229 aa  309  2e-83  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  63.16 
 
 
230 aa  294  1e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  64.91 
 
 
229 aa  293  1e-78  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  62.11 
 
 
230 aa  282  4.0000000000000003e-75  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  57.21 
 
 
231 aa  274  7e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  59.91 
 
 
225 aa  261  6.999999999999999e-69  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  52.73 
 
 
225 aa  240  1e-62  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  52.27 
 
 
226 aa  233  1.0000000000000001e-60  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  53.36 
 
 
226 aa  234  1.0000000000000001e-60  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  50 
 
 
225 aa  232  4.0000000000000004e-60  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  50.45 
 
 
226 aa  230  2e-59  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  52.27 
 
 
230 aa  228  4e-59  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  51.82 
 
 
230 aa  226  2e-58  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  51.82 
 
 
230 aa  226  2e-58  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  50.91 
 
 
225 aa  226  2e-58  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  50.45 
 
 
226 aa  225  4e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  48.28 
 
 
239 aa  225  5.0000000000000005e-58  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  53.12 
 
 
228 aa  225  5.0000000000000005e-58  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  48.94 
 
 
232 aa  225  5.0000000000000005e-58  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  52.49 
 
 
231 aa  223  2e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  52.47 
 
 
236 aa  223  2e-57  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  53.6 
 
 
243 aa  223  2e-57  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  51.1 
 
 
235 aa  222  3e-57  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  51.56 
 
 
225 aa  222  4e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  51.11 
 
 
225 aa  220  1.9999999999999999e-56  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  50.67 
 
 
234 aa  219  1.9999999999999999e-56  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  54.26 
 
 
228 aa  220  1.9999999999999999e-56  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  46.58 
 
 
235 aa  217  1e-55  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  48.67 
 
 
236 aa  217  1e-55  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  51.36 
 
 
225 aa  217  1e-55  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  51.1 
 
 
229 aa  214  8e-55  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  50.88 
 
 
231 aa  214  9.999999999999999e-55  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  45.58 
 
 
236 aa  213  2.9999999999999995e-54  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  47.09 
 
 
234 aa  212  3.9999999999999995e-54  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  47.79 
 
 
236 aa  212  4.9999999999999996e-54  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  46.7 
 
 
235 aa  211  7.999999999999999e-54  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_007413  Ava_1944  two component transcriptional regulator  46.49 
 
 
238 aa  210  1e-53  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  42.98 
 
 
233 aa  210  1e-53  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  45.98 
 
 
231 aa  210  1e-53  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  46.46 
 
 
233 aa  209  2e-53  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  45.65 
 
 
236 aa  208  6e-53  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  45.06 
 
 
239 aa  207  8e-53  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  45.06 
 
 
239 aa  207  8e-53  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  47.35 
 
 
236 aa  207  8e-53  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  45.18 
 
 
231 aa  207  9e-53  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  44.92 
 
 
236 aa  206  2e-52  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  48 
 
 
234 aa  206  2e-52  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_011831  Cagg_0393  two component transcriptional regulator, winged helix family  47.11 
 
 
227 aa  206  3e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.202895 
 
 
-
 
NC_008345  Sfri_2768  two component transcriptional regulator, winged helix family protein  49.11 
 
 
229 aa  205  4e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  49.09 
 
 
228 aa  204  7e-52  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.44 
 
 
236 aa  204  1e-51  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  45.96 
 
 
238 aa  204  1e-51  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  49.55 
 
 
241 aa  204  1e-51  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  45.29 
 
 
226 aa  204  1e-51  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  48 
 
 
237 aa  203  1e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  45.81 
 
 
236 aa  202  2e-51  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  46.35 
 
 
250 aa  203  2e-51  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.44 
 
 
240 aa  203  2e-51  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  48.7 
 
 
230 aa  203  2e-51  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  46.35 
 
 
250 aa  203  2e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  42.67 
 
 
228 aa  203  2e-51  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  46.35 
 
 
250 aa  203  2e-51  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  46.35 
 
 
238 aa  202  3e-51  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  46.35 
 
 
238 aa  202  3e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  46.35 
 
 
238 aa  202  3e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  46.9 
 
 
226 aa  202  3e-51  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  46.35 
 
 
238 aa  202  3e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  44.3 
 
 
231 aa  202  3e-51  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  48.21 
 
 
229 aa  202  3e-51  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  50 
 
 
228 aa  202  4e-51  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  47.98 
 
 
227 aa  202  4e-51  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  45.49 
 
 
238 aa  202  4e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  47.77 
 
 
231 aa  201  5e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  45.58 
 
 
236 aa  202  5e-51  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  46.32 
 
 
238 aa  202  5e-51  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  47.16 
 
 
237 aa  202  5e-51  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  45.92 
 
 
238 aa  201  6e-51  Bacillus cereus G9842  Bacteria  normal  hitchhiker  3.95849e-16 
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  45.92 
 
 
238 aa  201  6e-51  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  46.67 
 
 
232 aa  201  6e-51  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.70324 
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  47.58 
 
 
227 aa  201  7e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  48.21 
 
 
237 aa  201  7e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  46.67 
 
 
225 aa  201  7e-51  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  48.21 
 
 
236 aa  201  7e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  41.26 
 
 
232 aa  201  9e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00347  DNA-binding response regulator in two-component regulatory system with PhoR (or CreC)  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3210  two component transcriptional regulator PhoB, winged helix family  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli DH1  Bacteria  normal  0.146413  n/a   
 
 
-
 
NC_010468  EcolC_3234  transcriptional regulator PhoB  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli ATCC 8739  Bacteria  normal  0.456974  unclonable  0.00000000819474 
 
 
-
 
NC_009801  EcE24377A_0427  transcriptional regulator PhoB  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0435  transcriptional regulator PhoB  48.43 
 
 
229 aa  201  9.999999999999999e-51  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0318  transcriptional regulator PhoB  47.98 
 
 
229 aa  200  9.999999999999999e-51  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0467  transcriptional regulator PhoB  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0429  transcriptional regulator PhoB  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli SMS-3-5  Bacteria  normal  0.283039  normal 
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  43.05 
 
 
223 aa  201  9.999999999999999e-51  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_012892  B21_00351  hypothetical protein  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  42.34 
 
 
227 aa  201  9.999999999999999e-51  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_011353  ECH74115_0475  transcriptional regulator PhoB  47.98 
 
 
229 aa  200  9.999999999999999e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  44.89 
 
 
232 aa  199  1.9999999999999998e-50  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  48.21 
 
 
230 aa  200  1.9999999999999998e-50  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
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