Gene Ava_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1944 
Symbol 
ID3681663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2418915 
End bp2419631 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content43% 
IMG OID637717285 
Producttwo component transcriptional regulator 
Protein accessionYP_322461 
Protein GI75908165 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTC TAATTGTTGA GGATGAATCA GAAATTGCTC AGTTAATTCA ACATTCCTTA 
GAAAAAGAGG GCTTTTCCTG TCGGACTAGC CGCGATGGAA TCAATGCTTT ACGAATGTTC
CAAGAACAAC CACCAGATTT AATCATCCTA GACCTGATGA TTCCAGGGTT AGATGGGTTG
GAAGTTTGCG CGAGAATTCG CCAGAAACCT GGGGCAAAAG ACCCATATAT ACTAATGCTT
ACAGCTAAAG GTGAGGAAAT AGACCGGGTA ATTGGCTTGT CTACGGGTGC TGATGACTAT
ATGGTCAAAC CCTTCAGCCC TAGAGAGTTG GTAGCGCGAG TGCGGGCGCT TCTAAGGCGC
AGTCTACGTC AAGGGGGACA AAATCAGGTA AGTCGAACTC AACACTTTAT AGTAGATGTA
GACCAACGGA CTGCTAGTCG TCAAATAGAT GCCCATCAAG CAGAAGCTTT AGATTTAACT
ACTCTAGAAT TTAATTTATT AAGCACTTTT GTCAGCAATC CTGGGCGGGT GTGGAACCGA
ACCCAACTAA TTGACAAATT GTGGGGAGAT AATTTTTTTG GTGATGAGCG TGTTGTGGAT
ACTCATGTAG CTAGGCTCAG AAAAAAAATT GAGCCTGATC CCACTAATCC CAGTTTTATT
AAAACTGTCG TCGGAGTTGG TTATAAATTT GAAGACTCTC CCGTAATTTC AGCATGA
 
Protein sequence
MDILIVEDES EIAQLIQHSL EKEGFSCRTS RDGINALRMF QEQPPDLIIL DLMIPGLDGL 
EVCARIRQKP GAKDPYILML TAKGEEIDRV IGLSTGADDY MVKPFSPREL VARVRALLRR
SLRQGGQNQV SRTQHFIVDV DQRTASRQID AHQAEALDLT TLEFNLLSTF VSNPGRVWNR
TQLIDKLWGD NFFGDERVVD THVARLRKKI EPDPTNPSFI KTVVGVGYKF EDSPVISA