More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_1893 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_1893  two component transcriptional regulator  100 
 
 
235 aa  480  1e-135  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  57.02 
 
 
236 aa  271  5.000000000000001e-72  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  54.02 
 
 
243 aa  258  4e-68  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  48.89 
 
 
230 aa  223  2e-57  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  50.45 
 
 
225 aa  222  3e-57  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  49.33 
 
 
231 aa  222  3e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  51.1 
 
 
227 aa  222  3e-57  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  46.46 
 
 
226 aa  222  4e-57  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  49.78 
 
 
230 aa  221  9e-57  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  48.23 
 
 
226 aa  220  9.999999999999999e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  49.34 
 
 
229 aa  219  1.9999999999999999e-56  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  48 
 
 
230 aa  219  1.9999999999999999e-56  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  47.56 
 
 
230 aa  218  5e-56  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  48.9 
 
 
229 aa  218  8.999999999999998e-56  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  48.89 
 
 
226 aa  217  1e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  47.32 
 
 
226 aa  217  1e-55  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  48.89 
 
 
227 aa  216  2e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  49.78 
 
 
230 aa  212  2.9999999999999995e-54  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  47.56 
 
 
225 aa  212  3.9999999999999995e-54  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  47.77 
 
 
225 aa  212  4.9999999999999996e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  47.77 
 
 
225 aa  211  9e-54  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  46.43 
 
 
225 aa  209  2e-53  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  45.26 
 
 
234 aa  209  4e-53  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  46.61 
 
 
272 aa  209  4e-53  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  44.2 
 
 
231 aa  208  5e-53  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  47.32 
 
 
236 aa  208  6e-53  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  45.54 
 
 
236 aa  207  1e-52  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  44.74 
 
 
228 aa  204  1e-51  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  45.09 
 
 
233 aa  202  2e-51  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  45.98 
 
 
236 aa  202  3e-51  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  43.61 
 
 
238 aa  201  8e-51  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  44.74 
 
 
232 aa  201  9e-51  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1208  phosphate regulon response regulator PhoB  43.16 
 
 
233 aa  200  9.999999999999999e-51  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  44.59 
 
 
231 aa  201  9.999999999999999e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  47.19 
 
 
228 aa  199  1.9999999999999998e-50  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  47.19 
 
 
239 aa  199  1.9999999999999998e-50  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  43.56 
 
 
236 aa  200  1.9999999999999998e-50  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  45.41 
 
 
236 aa  199  3e-50  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  45.61 
 
 
225 aa  199  3.9999999999999996e-50  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  43.61 
 
 
232 aa  197  1.0000000000000001e-49  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  45.61 
 
 
230 aa  197  2.0000000000000003e-49  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  46.61 
 
 
233 aa  196  2.0000000000000003e-49  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  43.04 
 
 
231 aa  196  2.0000000000000003e-49  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_011138  MADE_03440  putative DNA-binding response regulator PhoB  44.02 
 
 
229 aa  196  3e-49  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  47.37 
 
 
234 aa  196  3e-49  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  44.98 
 
 
253 aa  196  3e-49  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  45.98 
 
 
228 aa  196  3e-49  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  44.74 
 
 
233 aa  195  5.000000000000001e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  45.65 
 
 
229 aa  194  8.000000000000001e-49  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  47.56 
 
 
225 aa  194  1e-48  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  43.78 
 
 
233 aa  194  1e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  46.09 
 
 
241 aa  194  1e-48  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_007520  Tcr_0541  two component transcriptional regulator  45.26 
 
 
230 aa  194  1e-48  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  47.83 
 
 
265 aa  194  1e-48  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  42.79 
 
 
235 aa  193  2e-48  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  45.61 
 
 
229 aa  192  3e-48  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1053  two component transcriptional regulator  43.48 
 
 
229 aa  192  3e-48  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  40.69 
 
 
239 aa  192  3e-48  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_007794  Saro_2281  two component transcriptional regulator  44.93 
 
 
229 aa  192  4e-48  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331932  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  46.52 
 
 
242 aa  192  5e-48  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  44.89 
 
 
232 aa  192  5e-48  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.70324 
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  41.41 
 
 
236 aa  191  6e-48  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  45.61 
 
 
231 aa  191  9e-48  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_013411  GYMC61_0523  two component transcriptional regulator, winged helix family  45.18 
 
 
224 aa  191  1e-47  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_7423  two component transcriptional regulator PhoB, winged helix family  45.89 
 
 
234 aa  190  1e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  43.04 
 
 
229 aa  190  1e-47  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  45.22 
 
 
234 aa  190  2e-47  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  41.18 
 
 
235 aa  190  2e-47  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0253  DNA-binding response regulator PhoB  43.48 
 
 
229 aa  189  4e-47  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0824  two component transcriptional regulator, winged helix family  43.83 
 
 
229 aa  189  4e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  44.78 
 
 
239 aa  189  5e-47  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_011206  Lferr_1151  two component transcriptional regulator, winged helix family  46.29 
 
 
243 aa  188  5e-47  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6685  two component transcriptional regulator  45.45 
 
 
234 aa  188  5e-47  Methylobacterium sp. 4-46  Bacteria  normal  0.599421  normal 
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  44.78 
 
 
234 aa  188  5e-47  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_011761  AFE_1434  DNA-binding response regulator PhoB  46.29 
 
 
243 aa  188  5e-47  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  42.11 
 
 
229 aa  188  5.999999999999999e-47  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  43.56 
 
 
242 aa  188  7e-47  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  44.3 
 
 
226 aa  188  8e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_007954  Sden_2689  phosphate regulon transcriptional regulatory protein phoB  44.78 
 
 
229 aa  187  8e-47  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000627834  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  41.3 
 
 
231 aa  188  8e-47  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_008789  Hhal_0098  two component transcriptional regulator  42.92 
 
 
229 aa  188  8e-47  Halorhodospira halophila SL1  Bacteria  normal  0.761303  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  44.3 
 
 
226 aa  187  1e-46  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  40.26 
 
 
236 aa  187  1e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_009379  Pnuc_1597  two component transcriptional regulator  42.62 
 
 
237 aa  187  1e-46  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  45.18 
 
 
234 aa  187  1e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  44.78 
 
 
228 aa  187  1e-46  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2768  two component transcriptional regulator, winged helix family protein  44.35 
 
 
229 aa  187  1e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  43.75 
 
 
228 aa  186  2e-46  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_009049  Rsph17029_1257  two component transcriptional regulator  45.09 
 
 
230 aa  186  2e-46  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.621627  normal 
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  39.83 
 
 
234 aa  186  2e-46  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  39.83 
 
 
234 aa  186  2e-46  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_007493  RSP_2599  phosphate regulon transcriptional regulator, PhoR  45.09 
 
 
230 aa  186  2e-46  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  42.31 
 
 
230 aa  186  3e-46  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  41.96 
 
 
234 aa  186  3e-46  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1403  two component transcriptional regulator  44.35 
 
 
229 aa  185  4e-46  Shewanella baltica OS195  Bacteria  hitchhiker  0.00109837  normal  0.0219543 
 
 
-
 
NC_009052  Sbal_1378  two component transcriptional regulator  44.35 
 
 
229 aa  185  4e-46  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000291119  n/a   
 
 
-
 
NC_011663  Sbal223_2981  two component transcriptional regulator PhoB, winged helix family  44.35 
 
 
229 aa  185  4e-46  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000220801  hitchhiker  0.00121997 
 
 
-
 
NC_009428  Rsph17025_1924  two component transcriptional regulator  45.09 
 
 
230 aa  186  4e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal  0.399122 
 
 
-
 
NC_009665  Shew185_1364  two component transcriptional regulator  44.35 
 
 
229 aa  185  4e-46  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000657343  n/a   
 
 
-
 
NC_009901  Spea_2969  two component transcriptional regulator  43.91 
 
 
229 aa  186  4e-46  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.000000855765  n/a   
 
 
-
 
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