More than 300 homologs were found in PanDaTox collection
for query gene Ppro_3155 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_3155  two component transcriptional regulator  100 
 
 
228 aa  456  9.999999999999999e-129  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  68.89 
 
 
226 aa  307  9e-83  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  67.56 
 
 
225 aa  306  1.0000000000000001e-82  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  66.22 
 
 
226 aa  293  1e-78  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  65.33 
 
 
225 aa  292  3e-78  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  65.18 
 
 
226 aa  285  2.9999999999999996e-76  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  64.29 
 
 
225 aa  283  2.0000000000000002e-75  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  67.11 
 
 
225 aa  281  5.000000000000001e-75  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  61.61 
 
 
226 aa  281  7.000000000000001e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  63.56 
 
 
225 aa  280  9e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  63.84 
 
 
225 aa  277  8e-74  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  52.21 
 
 
236 aa  235  5.0000000000000005e-61  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  54.42 
 
 
243 aa  234  7e-61  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  53.39 
 
 
230 aa  226  3e-58  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  53.12 
 
 
227 aa  225  5.0000000000000005e-58  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  51.53 
 
 
230 aa  224  8e-58  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  51.28 
 
 
229 aa  223  2e-57  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  50.22 
 
 
229 aa  223  2e-57  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  52.49 
 
 
230 aa  223  2e-57  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  52.04 
 
 
230 aa  222  4e-57  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  51.98 
 
 
225 aa  220  1.9999999999999999e-56  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  50.68 
 
 
231 aa  218  7e-56  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  50.67 
 
 
227 aa  218  7.999999999999999e-56  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  50.9 
 
 
236 aa  216  2e-55  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  50.22 
 
 
236 aa  216  2.9999999999999998e-55  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  53.74 
 
 
228 aa  214  7e-55  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  47.35 
 
 
231 aa  212  2.9999999999999995e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  47.44 
 
 
236 aa  210  1e-53  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  47.84 
 
 
235 aa  210  1e-53  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  50 
 
 
236 aa  210  1e-53  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  47.64 
 
 
234 aa  209  2e-53  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  47.64 
 
 
234 aa  209  2e-53  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  48.43 
 
 
233 aa  209  3e-53  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  46.15 
 
 
234 aa  209  3e-53  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  48.66 
 
 
236 aa  209  4e-53  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  50.45 
 
 
236 aa  208  5e-53  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  47.77 
 
 
231 aa  207  9e-53  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  44.59 
 
 
235 aa  206  2e-52  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  48.26 
 
 
229 aa  206  3e-52  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  47.39 
 
 
272 aa  205  5e-52  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  51.33 
 
 
226 aa  204  6e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  47.75 
 
 
230 aa  204  8e-52  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  44.74 
 
 
235 aa  204  1e-51  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  45.76 
 
 
239 aa  203  2e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  45.76 
 
 
239 aa  202  3e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  45.76 
 
 
239 aa  202  3e-51  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  45.76 
 
 
239 aa  202  3e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  45.76 
 
 
239 aa  202  3e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  45.76 
 
 
239 aa  202  3e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  48.44 
 
 
229 aa  202  3e-51  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  46.61 
 
 
239 aa  202  3e-51  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  46.61 
 
 
239 aa  202  3e-51  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  45.76 
 
 
239 aa  202  3e-51  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  47.6 
 
 
236 aa  202  3e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  46.96 
 
 
232 aa  202  3e-51  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  49.56 
 
 
231 aa  202  4e-51  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  46.61 
 
 
239 aa  202  5e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  44.98 
 
 
231 aa  202  5e-51  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_008782  Ajs_2367  two component transcriptional regulator  47.75 
 
 
235 aa  201  9e-51  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  49.56 
 
 
228 aa  201  9.999999999999999e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  46.75 
 
 
242 aa  199  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.114994 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  43.72 
 
 
239 aa  200  1.9999999999999998e-50  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  47.81 
 
 
230 aa  199  3e-50  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  44.93 
 
 
236 aa  199  3.9999999999999996e-50  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  48.44 
 
 
253 aa  198  5e-50  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_009720  Xaut_0202  two component transcriptional regulator  48.47 
 
 
233 aa  198  5e-50  Xanthobacter autotrophicus Py2  Bacteria  normal  0.382528  normal 
 
 
-
 
NC_011992  Dtpsy_1491  two component transcriptional regulator PhoB, winged helix family  47.3 
 
 
235 aa  198  6e-50  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1612  two component transcriptional regulator  45.71 
 
 
259 aa  198  7e-50  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00249249  normal 
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  45.34 
 
 
238 aa  198  7e-50  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  50.88 
 
 
228 aa  197  9e-50  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  50.88 
 
 
228 aa  197  9e-50  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  50.88 
 
 
228 aa  197  9e-50  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  45.02 
 
 
230 aa  197  1.0000000000000001e-49  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  48.68 
 
 
226 aa  197  1.0000000000000001e-49  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  44.1 
 
 
231 aa  197  1.0000000000000001e-49  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  46.96 
 
 
234 aa  197  1.0000000000000001e-49  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  45.18 
 
 
232 aa  196  2.0000000000000003e-49  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_012791  Vapar_2316  two component transcriptional regulator PhoB, winged helix family  46.88 
 
 
230 aa  196  2.0000000000000003e-49  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  46.75 
 
 
256 aa  197  2.0000000000000003e-49  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  48.23 
 
 
239 aa  196  3e-49  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  44.35 
 
 
234 aa  196  3e-49  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  49.12 
 
 
226 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  48.23 
 
 
234 aa  196  3e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  50.44 
 
 
228 aa  196  3e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_008752  Aave_2631  two component transcriptional regulator  46.85 
 
 
235 aa  196  3e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  0.552533  normal  0.0653315 
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  48.02 
 
 
234 aa  195  4.0000000000000005e-49  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.71 
 
 
229 aa  195  4.0000000000000005e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  48.02 
 
 
229 aa  195  4.0000000000000005e-49  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  48.66 
 
 
227 aa  195  5.000000000000001e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  46.09 
 
 
234 aa  195  5.000000000000001e-49  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.37 
 
 
244 aa  195  6e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.132168 
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  46.85 
 
 
242 aa  195  6e-49  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  47.79 
 
 
230 aa  194  7e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  45.02 
 
 
230 aa  194  7e-49  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  45.81 
 
 
231 aa  194  7e-49  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  44.1 
 
 
230 aa  194  7e-49  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  48 
 
 
230 aa  194  7e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_002976  SERP1055  DNA-binding response regulator SrrA  45.96 
 
 
241 aa  194  8.000000000000001e-49  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  49.56 
 
 
226 aa  194  8.000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  41.23 
 
 
227 aa  194  9e-49  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
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