Gene Dret_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0467 
Symbol 
ID8418273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp572368 
End bp573060 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content57% 
IMG OID645037029 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003197342 
Protein GI258404600 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT ATACTGTGCT CCTCGTGGAA GACGAGGTGG ATATCCTGAA TCTGTTGCGC 
ATCAATTTTG AAAACGGCGG TTTTCGAGTT TTGACTGCGG AAAATGGGTT CCAGGCCCTG
GATGTTTTGA GCAGCGCACC AGTTGACCTG GTCGTCCTGG ATCTGATGCT GCCCGGCAAG
GATGGCTTGG AAGTCTGCCG TGAATTGCGT TCCCGGGAGT CCACGAAACA TTTACCGGTG
ATCATGCTCA CAGCCAAAGG CGACGAGGTC GACCGCATCG TTGGACTGGA ACTCGGCGCT
GACGACTATG TGGTGAAGCC ATTTAGTCCC CGGGAGCTTT TGCTCCGGGC CAAGGCGGTC
ATGCGTCGCG GCAAACCGCA GCCGGAAGAA GAAACCCTAT GGGAGTCGGG AGGGTTGCGC
GTCGATTTCG GGACCTACAA AGTGACCGTC GACGGCGAAG ACCGGGAATT GACAGCCACC
GAATTTCGGC TTTTGGTCCA TCTCATCCGC AGTCGGGGCA AGGTCCAGAC CCGTGATCAA
TTGTTGAACA AGGTTTGGGG GTATGAATTC GAAGGCTATG CCCGAACCGT GGATACCCAT
GTCCGCCGCT TGCGGCACAA GATTGAACCG TATGCTGCCA TTGTCGAGAC CGTCCGCGGG
GTGGGCTACC GCCTCCACGG TCAGGAGGAG TGA
 
Protein sequence
MTTYTVLLVE DEVDILNLLR INFENGGFRV LTAENGFQAL DVLSSAPVDL VVLDLMLPGK 
DGLEVCRELR SRESTKHLPV IMLTAKGDEV DRIVGLELGA DDYVVKPFSP RELLLRAKAV
MRRGKPQPEE ETLWESGGLR VDFGTYKVTV DGEDRELTAT EFRLLVHLIR SRGKVQTRDQ
LLNKVWGYEF EGYARTVDTH VRRLRHKIEP YAAIVETVRG VGYRLHGQEE