More than 300 homologs were found in PanDaTox collection
for query gene Cag_0435 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007514  Cag_0435  two component transcriptional regulator  100 
 
 		 253 aa  515  1.0000000000000001e-145  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  79.57 
 
 		 236 aa  380  1e-104  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  71.86 
 
 		 233 aa  341  7e-93  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  68.64 
 
 		 236 aa  338  5.9999999999999996e-92  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal  1 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  71.81 
 
 		 236 aa  336  1.9999999999999998e-91  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  72.25 
 
 		 236 aa  336  2.9999999999999997e-91  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  69.16 
 
 		 236 aa  323  1e-87  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.0000906935 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  49.15 
 
 		 243 aa  231  8.000000000000001e-60  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal  1 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  47.41 
 
 		 236 aa  224  1e-57  Magnetococcus sp. MC-1  Bacteria  normal  1  decreased coverage  0.00391258 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  47.32 
 
 		 226 aa  221  6e-57  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  51.34 
 
 		 225 aa  221  9e-57  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  48.46 
 
 		 230 aa  220  1.9999999999999999e-56  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  48.46 
 
 		 230 aa  219  3e-56  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  48.46 
 
 		 230 aa  219  3e-56  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  50.45 
 
 		 225 aa  218  6e-56  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  46.88 
 
 		 226 aa  215  4e-55  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  48.2 
 
 		 225 aa  215  5e-55  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  49.11 
 
 		 226 aa  214  7e-55  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.575064 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  47.3 
 
 		 226 aa  214  9.999999999999999e-55  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  46.02 
 
 		 231 aa  211  7e-54  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.777838 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  47.98 
 
 		 225 aa  208  6e-53  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  46.85 
 
 		 225 aa  207  1e-52  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  44.78 
 
 		 230 aa  206  4e-52  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  45.13 
 
 		 227 aa  201  9.999999999999999e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal  1 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  44.4 
 
 		 229 aa  200  9.999999999999999e-51  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.258551 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  44.16 
 
 		 230 aa  200  1.9999999999999998e-50  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  48.44 
 
 		 228 aa  198  6e-50  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  44.98 
 
 		 235 aa  196  4.0000000000000005e-49  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.203788 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  44.25 
 
 		 227 aa  193  2e-48  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  43.89 
 
 		 228 aa  191  8e-48  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0605198 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  42.73 
 
 		 229 aa  190  2e-47  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  46.4 
 
 		 225 aa  188  9e-47  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  40.62 
 
 		 231 aa  187  2e-46  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  44.34 
 
 		 234 aa  186  2e-46  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  43.05 
 
 		 226 aa  184  1.0000000000000001e-45  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  44.69 
 
 		 230 aa  182  5.0000000000000004e-45  Caulobacter sp. K31  Bacteria  normal  1  normal  0.281853 
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  44.39 
 
 		 225 aa  181  7e-45  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  42.44 
 
 		 237 aa  181  8.000000000000001e-45  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  39.38 
 
 		 230 aa  181  9.000000000000001e-45  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  40.99 
 
 		 231 aa  181  1e-44  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  44.78 
 
 		 236 aa  181  1e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  unclonable  0.0000000182155 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  40.09 
 
 		 230 aa  181  1e-44  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  41.99 
 
 		 228 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.788201 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  42.04 
 
 		 226 aa  180  2e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  40.61 
 
 		 238 aa  179  4.999999999999999e-44  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  41.03 
 
 		 235 aa  178  5.999999999999999e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  41.48 
 
 		 229 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  42.36 
 
 		 229 aa  177  1e-43  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  39.56 
 
 		 226 aa  177  2e-43  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  42.92 
 
 		 233 aa  177  2e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  42.17 
 
 		 229 aa  176  2e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  41.85 
 
 		 230 aa  176  4e-43  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  41.48 
 
 		 230 aa  176  4e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  42.48 
 
 		 225 aa  176  4e-43  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  37.77 
 
 		 236 aa  176  4e-43  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_003296  RS05646  two-component response regulator transcription regulator protein  44.25 
 
 		 219 aa  175  7e-43  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  42.67 
 
 		 226 aa  175  7e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  41.23 
 
 		 228 aa  174  9e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal  1 
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  44.64 
 
 		 234 aa  173  1.9999999999999998e-42  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  0.473137 
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  40.77 
 
 		 239 aa  173  1.9999999999999998e-42  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  41.23 
 
 		 228 aa  173  1.9999999999999998e-42  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  42.34 
 
 		 228 aa  174  1.9999999999999998e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  41.23 
 
 		 228 aa  173  1.9999999999999998e-42  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  41.23 
 
 		 228 aa  173  1.9999999999999998e-42  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.682961 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  44.1 
 
 		 227 aa  172  2.9999999999999996e-42  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_013165  Shel_02200  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.11 
 
 		 231 aa  173  2.9999999999999996e-42  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  44.93 
 
 		 234 aa  173  2.9999999999999996e-42  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  39.38 
 
 		 226 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  40.61 
 
 		 272 aa  173  2.9999999999999996e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal  1 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  42.99 
 
 		 229 aa  172  2.9999999999999996e-42  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal  1 
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  44.93 
 
 		 245 aa  172  3.9999999999999995e-42  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  44.93 
 
 		 234 aa  172  3.9999999999999995e-42  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  41.33 
 
 		 226 aa  172  3.9999999999999995e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4211  two component transcriptional regulator, winged helix family  42.92 
 
 		 219 aa  172  5.999999999999999e-42  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_4321  two component transcriptional regulator, winged helix family  42.92 
 
 		 219 aa  172  5.999999999999999e-42  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.0131168 
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  39.38 
 
 		 226 aa  172  5.999999999999999e-42  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  40.97 
 
 		 228 aa  172  5.999999999999999e-42  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004116  SAG1961  phosphate regulon response regulator PhoB  40.97 
 
 		 225 aa  171  6.999999999999999e-42  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.411469  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  40.71 
 
 		 234 aa  171  6.999999999999999e-42  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  38.05 
 
 		 229 aa  171  9e-42  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  40.44 
 
 		 226 aa  171  1e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  41.7 
 
 		 242 aa  171  1e-41  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal  1 
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  40.09 
 
 		 224 aa  171  1e-41  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  41.15 
 
 		 231 aa  170  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  41.48 
 
 		 239 aa  170  2e-41  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.220817 
 
 
-
 
NC_013170  Ccur_02230  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  38.5 
 
 		 229 aa  170  2e-41  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  38.91 
 
 		 239 aa  170  2e-41  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  40.97 
 
 		 227 aa  170  2e-41  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal  1 
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  42.15 
 
 		 230 aa  170  2e-41  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.305183 
 
 
-
 
NC_011729  PCC7424_2845  two component transcriptional regulator, winged helix family  41.74 
 
 		 234 aa  170  2e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  43.61 
 
 		 226 aa  171  2e-41  Frankia sp. CcI3  Bacteria  normal  1  normal  0.734397 
 
 
-
 
NC_007948  Bpro_2257  two component transcriptional regulator  42.08 
 
 		 243 aa  170  2e-41  Polaromonas sp. JS666  Bacteria  normal  0.512842  normal  0.410356 
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  40.54 
 
 		 225 aa  170  2e-41  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_013440  Hoch_0268  two component transcriptional regulator, winged helix family  41.23 
 
 		 227 aa  170  2e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.509377 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  39.74 
 
 		 232 aa  170  2e-41  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  41.48 
 
 		 234 aa  170  2e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.809056 
 
 
-
 
NC_010001  Cphy_2855  two component transcriptional regulator  39.91 
 
 		 224 aa  170  2e-41  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000952101  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  40 
 
 		 238 aa  169  3e-41  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  40.53 
 
 		 223 aa  170  3e-41  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  41.92 
 
 		 234 aa  169  3e-41  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal  1 
 
 
-
 
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