Gene Rpic_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4211 
Symbol 
ID6285646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp494543 
End bp495202 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID642618694 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001892735 
Protein GI187926390 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGA TCATTGAAGA CGAACCCAAG CTGGCTGCAT TGATGACCGA CTATCTGCGC 
GCCGCCCACT ACGAGACCGA GTGGCTGGCC GATGGCACGC ACGCAGCGCA GCGCATTCGC
GAGACGGCAC CCGAACTCGT GCTGCTCGAC CTCATGCTGC CCGGCAAGGA CGGCCTGGAG
ATCTGCCGGG AGGTGCGCGC CTTCAGCGAG GTGCCCATCG TCATGGTGAC GGCGCGCGTG
GAAGAAATCG ACCGCCTGCT CGGCCTTGAG CTGGGCGCCG ACGACTACGT CTGCAAGCCC
TTCAGCCCGC GCGAACTGGT GGCGCGCATC AAGACCATCC TGCGGCGCGT ACAGCGCGGT
GGCGGCGTGC CGGAGAGCGC GTTGCACATC GATGCTGCTG CCTATGCCGC CACGCTGCGC
GGCCAGCGCC TCGACCTCAC GCCGGTGGAA TTTCGCCTGC TGGCCGCGCT TGCGGGCGCA
CCGGGGCGCA TCCTCTCACG CTCGAATCTG CTTGAGCAGA TCTACGACGA CCACCGCATC
GTGACCGACC GCACGGTCGA TACGCACATC AAGAATCTGC GCCGCAAGAT GGAGCAGGTG
AGCCCGGGCA CCGAGATGAT CCATTCCGTC TATGGCGTGG GTTACCGGCT CGACGCCTGA
 
Protein sequence
MILIIEDEPK LAALMTDYLR AAHYETEWLA DGTHAAQRIR ETAPELVLLD LMLPGKDGLE 
ICREVRAFSE VPIVMVTARV EEIDRLLGLE LGADDYVCKP FSPRELVARI KTILRRVQRG
GGVPESALHI DAAAYAATLR GQRLDLTPVE FRLLAALAGA PGRILSRSNL LEQIYDDHRI
VTDRTVDTHI KNLRRKMEQV SPGTEMIHSV YGVGYRLDA