Gene Cphy_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2855 
Symbol 
ID5745128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3503712 
End bp3504386 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content34% 
IMG OID641293956 
Producttwo component transcriptional regulator 
Protein accessionYP_001559954 
Protein GI160880986 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000952101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCC TAAAAGTTTT AGTGGTAGAT GATGAAAGCA GAATGCGTAA ATTAGTAAAG 
GATTTCCTTT CTCGAAGTAA CTATGATGTA TTAGAAGCAG AGAATGGGGA GCAGGCAGTT
GATATATTCT TTGAACAAAA AGATATATCC TTAATTATTC TTGATGTGAT GATGCCAAAG
ATGGACGGAT GGCAAGTATG TAAAGAAATC CGTAAATATT CTAAGGTCCC AATCATTATG
CTTACTGCAA AAAGTGATGA GAAAGATGAA TTATTAGGTT TTGAATTAGG TGTTGATGAA
TATATTTCGA AACCATTTAG TCCAAAAATC TTAGTTGCGC GTGTAGAAGC CATTGTACGT
CGATCAATAC AAACTTTGGA TGAGACTATG GAAATTGGTG GTATTGTGAT AGATAAGGCA
GCGCATGAAG TTAAGATAGA TGATTTAGCG ATTGAGCTTA GCGTTAAAGA ATTTGAACTA
TTAACCTATT TTATAACAAA TAGAGGAGTT GCTTTATCCA GGGAAAAGAT TTTAAATAAT
GTATGGAATT ATGATTACTT TGGAGATGCT AGAACCATTG ATACTCATGT GAAAAAACTT
CGCAGTAAAA TGGGAGATAA GGGTGATTAT ATCAAAACCA TCTGGGGTAT GGGTTATAAA
TTCGAGGTGG TATAA
 
Protein sequence
MERLKVLVVD DESRMRKLVK DFLSRSNYDV LEAENGEQAV DIFFEQKDIS LIILDVMMPK 
MDGWQVCKEI RKYSKVPIIM LTAKSDEKDE LLGFELGVDE YISKPFSPKI LVARVEAIVR
RSIQTLDETM EIGGIVIDKA AHEVKIDDLA IELSVKEFEL LTYFITNRGV ALSREKILNN
VWNYDYFGDA RTIDTHVKKL RSKMGDKGDY IKTIWGMGYK FEVV