More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_2845 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_2845  two component transcriptional regulator, winged helix family  100 
 
 
234 aa  476  1e-134  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_0489  two component transcriptional regulator, winged helix family  81.2 
 
 
234 aa  382  1e-105  Cyanothece sp. PCC 8802  Bacteria  normal  0.210896  normal  0.371413 
 
 
-
 
NC_011726  PCC8801_0475  two component transcriptional regulator, winged helix family  81.2 
 
 
234 aa  382  1e-105  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1944  two component transcriptional regulator  77.25 
 
 
238 aa  377  1e-103  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1085  two component transcriptional regulator, winged helix family  71.06 
 
 
235 aa  341  7e-93  Cyanothece sp. PCC 7425  Bacteria  normal  0.224574  normal 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  52.99 
 
 
231 aa  233  1.0000000000000001e-60  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  50.22 
 
 
230 aa  221  7e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  48.93 
 
 
236 aa  214  7e-55  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  50.64 
 
 
231 aa  212  2.9999999999999995e-54  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  50 
 
 
228 aa  208  5e-53  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  43.35 
 
 
237 aa  207  8e-53  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  45.69 
 
 
229 aa  207  1e-52  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  46.55 
 
 
229 aa  206  2e-52  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  45.89 
 
 
229 aa  206  3e-52  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  43.91 
 
 
226 aa  204  9e-52  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_014158  Tpau_0093  two component transcriptional regulator, winged helix family  45.69 
 
 
232 aa  204  1e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  44.78 
 
 
230 aa  203  2e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  47.84 
 
 
236 aa  203  2e-51  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  48.48 
 
 
236 aa  202  4e-51  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  45.34 
 
 
242 aa  202  5e-51  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.48 
 
 
236 aa  201  7e-51  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  44.35 
 
 
231 aa  201  9e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0258  response regulator  45.06 
 
 
237 aa  201  9.999999999999999e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.86 
 
 
240 aa  200  9.999999999999999e-51  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  44.49 
 
 
230 aa  200  9.999999999999999e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  48.48 
 
 
237 aa  200  9.999999999999999e-51  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_013216  Dtox_2625  two component transcriptional regulator, winged helix family  46.35 
 
 
237 aa  200  9.999999999999999e-51  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00000254862  normal 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  43.72 
 
 
231 aa  199  1.9999999999999998e-50  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_009767  Rcas_1176  two component transcriptional regulator  48.07 
 
 
229 aa  200  1.9999999999999998e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.149936 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  47.62 
 
 
230 aa  200  1.9999999999999998e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  46.55 
 
 
227 aa  199  3.9999999999999996e-50  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  43.59 
 
 
228 aa  199  3.9999999999999996e-50  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  45.06 
 
 
238 aa  198  5e-50  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_005957  BT9727_0255  DNA-binding response regulator  45.85 
 
 
237 aa  197  9e-50  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  43.04 
 
 
226 aa  197  9e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  45.22 
 
 
227 aa  197  9e-50  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_011772  BCG9842_B4998  DNA-binding response regulator  44.98 
 
 
237 aa  197  9e-50  Bacillus cereus G9842  Bacteria  normal  0.709524  normal 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  47.19 
 
 
230 aa  197  1.0000000000000001e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  42.17 
 
 
226 aa  196  2.0000000000000003e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  43.04 
 
 
226 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  41.77 
 
 
228 aa  197  2.0000000000000003e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0316  DNA-binding response regulator  44.98 
 
 
237 aa  196  2.0000000000000003e-49  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0273  DNA-binding response regulator  45.41 
 
 
237 aa  196  3e-49  Bacillus anthracis str. Sterne  Bacteria  normal  0.484752  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  44.59 
 
 
238 aa  196  3e-49  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0287  DNA-binding response regulator  45.41 
 
 
237 aa  196  3e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.42222  n/a   
 
 
-
 
NC_011773  BCAH820_0317  DNA-binding response regulator  45.41 
 
 
237 aa  196  3e-49  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  43.04 
 
 
229 aa  196  3e-49  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00709514 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  45.53 
 
 
231 aa  195  4.0000000000000005e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  44.4 
 
 
231 aa  195  4.0000000000000005e-49  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  43.88 
 
 
234 aa  195  5.000000000000001e-49  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  44.54 
 
 
231 aa  195  5.000000000000001e-49  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  41.74 
 
 
226 aa  194  7e-49  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0312  response regulator receiver  46.49 
 
 
233 aa  194  7e-49  Nocardioides sp. JS614  Bacteria  normal  0.0102436  n/a   
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  46.19 
 
 
235 aa  194  8.000000000000001e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  44.02 
 
 
232 aa  194  1e-48  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  42.92 
 
 
229 aa  194  1e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1673  two component transcriptional regulator, winged helix family  45.22 
 
 
233 aa  194  1e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  43.16 
 
 
236 aa  194  1e-48  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_009523  RoseRS_0114  two component transcriptional regulator  50 
 
 
229 aa  193  2e-48  Roseiflexus sp. RS-1  Bacteria  normal  0.994086  normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  41.74 
 
 
225 aa  193  2e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  44.35 
 
 
226 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  43.16 
 
 
229 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  44.21 
 
 
230 aa  192  3e-48  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  44.02 
 
 
223 aa  192  4e-48  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  43.53 
 
 
239 aa  192  4e-48  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  46.12 
 
 
236 aa  192  4e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  46.35 
 
 
239 aa  192  4e-48  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_009523  RoseRS_0805  two component transcriptional regulator  45.26 
 
 
229 aa  192  5e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  43.29 
 
 
231 aa  192  5e-48  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  43.1 
 
 
239 aa  191  6e-48  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  43.1 
 
 
239 aa  191  6e-48  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  43.53 
 
 
231 aa  191  6e-48  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_011830  Dhaf_1367  two component transcriptional regulator, winged helix family  45.26 
 
 
230 aa  191  7e-48  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000177207  n/a   
 
 
-
 
NC_008699  Noca_3782  response regulator receiver  42.92 
 
 
297 aa  191  8e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1197  response regulator receiver  44.59 
 
 
230 aa  191  1e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  44.1 
 
 
231 aa  191  1e-47  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  41.13 
 
 
236 aa  190  1e-47  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  44.4 
 
 
230 aa  190  2e-47  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  42.86 
 
 
228 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  43.7 
 
 
239 aa  189  2e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0458  DNA-binding response regulator  44.78 
 
 
229 aa  189  2e-47  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00396749 
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  45.69 
 
 
227 aa  190  2e-47  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_011831  Cagg_1181  two component transcriptional regulator, winged helix family  45.06 
 
 
234 aa  189  2.9999999999999997e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00335068 
 
 
-
 
NC_009664  Krad_0896  two component transcriptional regulator, winged helix family  44.35 
 
 
226 aa  189  2.9999999999999997e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232326  hitchhiker  0.00518822 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  43.97 
 
 
233 aa  189  2.9999999999999997e-47  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  41.56 
 
 
227 aa  189  2.9999999999999997e-47  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  45.11 
 
 
233 aa  189  2.9999999999999997e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  44.4 
 
 
236 aa  189  4e-47  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  45.06 
 
 
233 aa  189  4e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  41.81 
 
 
234 aa  189  4e-47  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.727110000000001e-18 
 
 
-
 
NC_008726  Mvan_3674  two component transcriptional regulator  43.53 
 
 
246 aa  189  4e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.027909  normal 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  44.59 
 
 
228 aa  189  4e-47  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  42.24 
 
 
239 aa  188  5e-47  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  41.74 
 
 
226 aa  188  5.999999999999999e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1441  two component transcriptional regulator  46.75 
 
 
247 aa  188  5.999999999999999e-47  Arthrobacter sp. FB24  Bacteria  normal  0.167327  n/a   
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  44.35 
 
 
230 aa  188  7e-47  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  45.49 
 
 
230 aa  188  7e-47  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_007604  Synpcc7942_1012  two component transcriptional regulator  44.54 
 
 
257 aa  188  7e-47  Synechococcus elongatus PCC 7942  Bacteria  normal  0.658807  normal 
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  45.3 
 
 
232 aa  188  7e-47  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.74 
 
 
226 aa  187  8e-47  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
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