Gene DvMF_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0882 
Symbol 
ID7172771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1064865 
End bp1065557 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID643539383 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002435306 
Protein GI218885985 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.148935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAG AGCGCATTCT GGTGGTGGAA GACGACGAGG ACATCCTGCA GTTGCTGACC 
TTCACCTTCG AATCCGCCGG GTTCGAAGTG CGCACGGCCA CCACGGGGCG AGAAGGTCTG
GAGATCGCGC TGCGCCAGAA GCCCGCGCTG GTTCTGCTGG ACCTGATGCT GCCCGGCATG
AGCGGCCTTG ACGTGTGCCG CGAACTGAAG CGCATGCCGG AAACGGAAGA CGTGCCGGTG
ATCATGCTCA CCGCGCGCGG CGAGGAAGTG GACCGCATCG TGGGGCTGGA ACTGGGCGCC
GACGACTACG TGGTCAAGCC CTTCAGCCCG CGCGAACTGG TGCTGCGCAT CCGTGCCGTG
CTCAAGCGCG CGCAGGGCGT GGCCGAAAAC CCCCAGCGCT CGCAGTGGCA GATCGACGGG
CTGGCCCTGG ACCTGGACGC GCACCGGGTG GAGGTGGACG GCGAGGAAGC CGCCCTGACC
GCCACCGAAT TCCGCCTGCT GGCGGAACTG GTGCGCAACC GGGGCCGCGT GCGCACCCGC
GACCAGCTGC TGAACACGGT GTGGGGCTAC GAGTTCGAGG GGTACGCCCG CACGGTGGAT
ACCCACGTGC GCAGGCTGCG CCAGAAGATC GGCGGCTACG CGGCCATGAT CGAAACCATC
CGGGGCGTGG GATACCGCTT CAAGGAACAG TAG
 
Protein sequence
MTKERILVVE DDEDILQLLT FTFESAGFEV RTATTGREGL EIALRQKPAL VLLDLMLPGM 
SGLDVCRELK RMPETEDVPV IMLTARGEEV DRIVGLELGA DDYVVKPFSP RELVLRIRAV
LKRAQGVAEN PQRSQWQIDG LALDLDAHRV EVDGEEAALT ATEFRLLAEL VRNRGRVRTR
DQLLNTVWGY EFEGYARTVD THVRRLRQKI GGYAAMIETI RGVGYRFKEQ