Gene Daud_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1897 
Symbol 
ID6025477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1999472 
End bp2000155 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID641594715 
Producttwo component transcriptional regulator 
Protein accessionYP_001718022 
Protein GI169832040 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.151466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACGCCG GCGTGATTTT AATGGTTGAG GACGAGGCGG CGGTCCGGGA CGTAGCCCGG 
TTGTACCTGG AAAAGGAGGG TTTTCGGGTG GTGCCGGCCC TCGACGGGGA ACAGGCCCTG
GAACAACTGA CCGCGGTGAA CCCTGACCTG GTGATCCTGG ACATCATGCT GCCCAAGAAG
GACGGATGGA GTGTTTGCCG CGAGATCCGG CGGCAAACGG CCGTACCGAT CATCATGCTT
TCGGCCAAGG GCGAGGAGTA CGACCGGGTG CTCGGGCTGG AACTCGGTGC CGACGACTAC
GTCACCAAAC CTTTCAGCCC AAGGGAACTG GTGGCCCGGG TCAAAGCCGT CCTGCGCCGG
AGCAATGCCC CGGCGGGCAC GGGGGCCGGA CCGGCGCTCC GCTACCCGGG ACTGACCATC
GACACGGAGG CACGCCGGGT GGAGGTTGAA GGGCAGCCCA TCGCGCTCAC CCCCAAGGAA
TTCGAATTGC TGGCCTTTCT GGCTTCCCGG CCCCGGCGGG TTTTCAGCCG GGAGCAACTT
CTGGCCGGTG TCTGGGATTA CGAGTACCCC GGGGACACGC GCACCGTGGA TACCCACATC
AAGCGGCTGC GGGAGAAGCT CCGGGGCACA GGGCGGAACT ACCTAAAGAC AGTTTGGGGA
CTCGGCTATA AGTTTGAGGT GTAA
 
Protein sequence
MHAGVILMVE DEAAVRDVAR LYLEKEGFRV VPALDGEQAL EQLTAVNPDL VILDIMLPKK 
DGWSVCREIR RQTAVPIIML SAKGEEYDRV LGLELGADDY VTKPFSPREL VARVKAVLRR
SNAPAGTGAG PALRYPGLTI DTEARRVEVE GQPIALTPKE FELLAFLASR PRRVFSREQL
LAGVWDYEYP GDTRTVDTHI KRLREKLRGT GRNYLKTVWG LGYKFEV