More than 300 homologs were found in PanDaTox collection
for query gene Oter_2550 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_2550  two component transcriptional regulator  100 
 
 
228 aa  448  1e-125  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  55.11 
 
 
229 aa  243  1.9999999999999999e-63  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  53.57 
 
 
225 aa  243  1.9999999999999999e-63  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  53.33 
 
 
229 aa  239  2.9999999999999997e-62  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  51.12 
 
 
226 aa  238  8e-62  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  54.05 
 
 
230 aa  235  4e-61  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  52.19 
 
 
230 aa  235  4e-61  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  54.26 
 
 
227 aa  235  4e-61  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  51.82 
 
 
225 aa  234  9e-61  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  52.23 
 
 
225 aa  233  1.0000000000000001e-60  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  54.02 
 
 
230 aa  233  1.0000000000000001e-60  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  48.88 
 
 
226 aa  232  4.0000000000000004e-60  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  53.15 
 
 
230 aa  232  4.0000000000000004e-60  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  54.46 
 
 
225 aa  231  6e-60  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  53.74 
 
 
228 aa  231  8.000000000000001e-60  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  52.25 
 
 
227 aa  229  3e-59  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  52.23 
 
 
230 aa  228  7e-59  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  52.27 
 
 
225 aa  227  1e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  53.33 
 
 
231 aa  227  1e-58  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  52.27 
 
 
225 aa  226  3e-58  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  48.87 
 
 
233 aa  223  1e-57  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  51.36 
 
 
226 aa  222  3e-57  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  46.64 
 
 
236 aa  221  6e-57  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  48.68 
 
 
231 aa  221  8e-57  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  52 
 
 
225 aa  220  9.999999999999999e-57  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  47.06 
 
 
236 aa  220  9.999999999999999e-57  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  48.65 
 
 
226 aa  218  7e-56  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  47.96 
 
 
236 aa  217  8.999999999999998e-56  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  46.61 
 
 
236 aa  217  1e-55  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  50.45 
 
 
243 aa  216  2.9999999999999998e-55  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  48.23 
 
 
236 aa  215  5.9999999999999996e-55  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  44.44 
 
 
231 aa  214  9.999999999999999e-55  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  51.1 
 
 
229 aa  213  1.9999999999999998e-54  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  47.51 
 
 
236 aa  213  1.9999999999999998e-54  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  48.9 
 
 
232 aa  211  7.999999999999999e-54  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  47.81 
 
 
235 aa  210  2e-53  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  47.19 
 
 
235 aa  210  2e-53  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_008043  TM1040_3335  two component transcriptional regulator  48.03 
 
 
230 aa  209  3e-53  Ruegeria sp. TM1040  Bacteria  normal  normal  0.428008 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  45.89 
 
 
239 aa  205  4e-52  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  49.12 
 
 
261 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  50.45 
 
 
237 aa  203  2e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  51.12 
 
 
227 aa  202  3e-51  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  47.75 
 
 
234 aa  202  3e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50.22 
 
 
226 aa  201  6e-51  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  47.16 
 
 
236 aa  201  6e-51  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  48.44 
 
 
231 aa  201  7e-51  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  48.09 
 
 
235 aa  201  9.999999999999999e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_3637  response regulator receiver  50.44 
 
 
225 aa  201  9.999999999999999e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  0.135674  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  47.37 
 
 
226 aa  200  1.9999999999999998e-50  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_012791  Vapar_2316  two component transcriptional regulator PhoB, winged helix family  46.02 
 
 
230 aa  199  1.9999999999999998e-50  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  45.81 
 
 
235 aa  200  1.9999999999999998e-50  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  43.86 
 
 
236 aa  199  3e-50  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  45.78 
 
 
226 aa  199  3.9999999999999996e-50  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  46.78 
 
 
234 aa  198  6e-50  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_010322  PputGB1_5367  two component transcriptional regulator  46.02 
 
 
229 aa  198  6e-50  Pseudomonas putida GB-1  Bacteria  normal  normal  0.400776 
 
 
-
 
NC_009512  Pput_5228  two component transcriptional regulator  46.02 
 
 
229 aa  198  6e-50  Pseudomonas putida F1  Bacteria  normal  0.661336  normal  0.450139 
 
 
-
 
NC_002947  PP_5320  winged helix family two component transcriptional regulator  46.02 
 
 
242 aa  198  7e-50  Pseudomonas putida KT2440  Bacteria  normal  normal  0.023746 
 
 
-
 
NC_009077  Mjls_1381  two component transcriptional regulator  50 
 
 
228 aa  198  7e-50  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_008146  Mmcs_1347  two component transcriptional regulator  50 
 
 
228 aa  198  7e-50  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  40.18 
 
 
229 aa  198  7e-50  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1365  two component transcriptional regulator  50 
 
 
228 aa  198  7e-50  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  47.62 
 
 
228 aa  197  7.999999999999999e-50  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  48.48 
 
 
232 aa  197  1.0000000000000001e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  43.89 
 
 
253 aa  197  1.0000000000000001e-49  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  41.7 
 
 
223 aa  196  2.0000000000000003e-49  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  45.37 
 
 
229 aa  197  2.0000000000000003e-49  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  47.79 
 
 
230 aa  196  2.0000000000000003e-49  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  44.35 
 
 
231 aa  197  2.0000000000000003e-49  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_008262  CPR_2497  DNA-binding response regulator  45.29 
 
 
228 aa  196  2.0000000000000003e-49  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_70750  two-component response regulator PhoB  45.78 
 
 
229 aa  196  2.0000000000000003e-49  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  41.7 
 
 
223 aa  196  2.0000000000000003e-49  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  42.11 
 
 
238 aa  196  2.0000000000000003e-49  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6138  two-component response regulator PhoB  45.78 
 
 
229 aa  196  2.0000000000000003e-49  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0154  two component transcriptional regulator  45.58 
 
 
229 aa  196  3e-49  Pseudomonas putida W619  Bacteria  normal  normal  0.596099 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  44.54 
 
 
232 aa  196  3e-49  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  42.86 
 
 
230 aa  195  4.0000000000000005e-49  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  45.85 
 
 
234 aa  195  4.0000000000000005e-49  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  48 
 
 
227 aa  196  4.0000000000000005e-49  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  44.84 
 
 
228 aa  195  4.0000000000000005e-49  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_48520  phosphate regulon response regulator; PhoB  44.89 
 
 
229 aa  195  4.0000000000000005e-49  Azotobacter vinelandii DJ  Bacteria  normal  0.0667889  n/a   
 
 
-
 
NC_013757  Gobs_4285  two component transcriptional regulator, winged helix family  45.78 
 
 
238 aa  195  4.0000000000000005e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.83647  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  49.57 
 
 
235 aa  195  5.000000000000001e-49  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4408  two component transcriptional regulator  45.33 
 
 
229 aa  195  5.000000000000001e-49  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0897949 
 
 
-
 
NC_014158  Tpau_1076  two component transcriptional regulator, winged helix family  50.44 
 
 
228 aa  195  5.000000000000001e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  47.98 
 
 
231 aa  195  6e-49  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  46.41 
 
 
238 aa  195  6e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1288  two component transcriptional regulator  45.54 
 
 
238 aa  195  6e-49  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4712  two component transcriptional regulator  49.12 
 
 
228 aa  194  9e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.541483  normal  0.0134498 
 
 
-
 
NC_008726  Mvan_1752  two component transcriptional regulator  49.12 
 
 
228 aa  194  9e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.581522 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  46.64 
 
 
239 aa  194  9e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  41.7 
 
 
223 aa  194  1e-48  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_013530  Xcel_2514  two component transcriptional regulator, winged helix family  47.84 
 
 
226 aa  193  1e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.24701  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  41.26 
 
 
223 aa  194  1e-48  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK1193  response regulator  41.26 
 
 
223 aa  194  1e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  44.83 
 
 
232 aa  194  1e-48  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4249  two component transcriptional regulator, winged helix family  49.34 
 
 
225 aa  193  2e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  0.316157  normal 
 
 
-
 
NC_005957  BT9727_1191  response regulator  41.26 
 
 
223 aa  193  2e-48  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  44.8 
 
 
225 aa  192  2e-48  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  47.79 
 
 
225 aa  193  2e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  47.16 
 
 
235 aa  193  2e-48  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
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