| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4663 |
|---|
| Symbol | |
|---|
| ID | 5736510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5960675 |
|---|
| End bp | 5961373 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641281827 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001547422 |
|---|
| Protein GI | 159901175 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATA TTTTGGTGGT TGATGACGAA CCGAATATTC GCGAAGTGGT AGGCTTGTAT
TTGCGGCGCG AAGGCCATAC GGTGCTTGAG GCCAGCGATG GCGAGGCCGC TTTGCGCTTG
GCGCGTCAGC AACCACCCGA TTTGGTCGTG CTTGATCTGA TGTTGCCCAA AGTGACTGGC
TTAGAAGTTT GTCGGCGCTT GCAGAGCGAT CGCCGCACGC CAGTGATTAT GCTCACCGCC
AAGAGCGAGG AGAACGATCG CATCATTGGC CTCGGGGTTG GTGCTGATGA TTATGTGGTC
AAGCCATTTA GCCCACGCGA ATTGGTGGCC CGGGTGGAAG CGGTGTTGCG CCGTGTTCAG
CCGCAGCCCG ATGCTCCACC ACCCGACGAA CGCCCAATTG AACTTGGCGC ACTGCGGGTC
GATCCGCGCA CTCGTGATGT GCAAGTGGCG GGCAAATCGA TCAGCCTAAC TGCGCGTGAG
TTTGATTTGC TCTATTTTTT GGCACGCCAT CGCGAGCGTG TGTTTACCCG CGACCAACTG
ATGGAACTCG TTTGGGGCTA TACATTTTCT GCCGATACCA GCACCGTGAC GGTGCATATT
CGGCGCTTGC GCGAAAAAAT CGAAGACGAT CCGACTGCCC CGCGTTATTT GCAAACAGTT
TGGGGCGTGG GCTACAAACT CAGCGCAGGC GAACAATGA
|
|---|
| Protein sequence | MANILVVDDE PNIREVVGLY LRREGHTVLE ASDGEAALRL ARQQPPDLVV LDLMLPKVTG
LEVCRRLQSD RRTPVIMLTA KSEENDRIIG LGVGADDYVV KPFSPRELVA RVEAVLRRVQ
PQPDAPPPDE RPIELGALRV DPRTRDVQVA GKSISLTARE FDLLYFLARH RERVFTRDQL
MELVWGYTFS ADTSTVTVHI RRLREKIEDD PTAPRYLQTV WGVGYKLSAG EQ
|
|---|
| |