Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2333 |
Symbol | |
ID | 4809261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2780172 |
End bp | 2780870 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640107740 |
Product | two component transcriptional regulator |
Protein accession | YP_001038728 |
Protein GI | 125974818 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGA AAATCCTTGT TGTTGATGAC GAGAAAAATA TAGTTGACAT TCTCAAATTT AATTTGGCAA AAGAGGGTTT TTCCACGCTT GAAGCAAATG ACGGCGAACA AGCTATTGAA CTTGCGCTAA GTGAAAAGCC GGATTTGATA CTGCTGGACA TAATGCTTCC CAAATTGGAC GGCTTTACCG TTTGCCGCAA ATTGAGGGAA AGTATATCCA CTCCCATTAT AATGATTACT GCAAAGGAAG AGGAAGTTGA CAAGGTATTG GGATTGGAGC TTGGAGCGGA TGATTATATA ACAAAGCCTT TCAGCACGAG GGAGCTGATG GCGAGAGTAA AAGCCAATTT AAGAAGGGTT GCTTCCTCTG CGGAGACTCA AAAGAAGCAA AGCAATTATT TGAAATTCGG AGACTTGGAG ATAGATATCG AACATTATGA AGTAAGAAGA AACAATGAGG TAATTGAGCT GACATTAAGG GAATTTGAAC TTGTAAAATT CCTGGCATTG CAGCCGGGCC AGATATTTTC AAGGGAGACC CTTTTGGAAA AGGTCTGGGG TTATGAATAT TACGGCGACG TCCGTACGGT GGATGTGACT GTAAGAAGAG TGAGGGAGAA GATTGAAAAG GATCCGAGCA ATCCTTGCTA CATTATGACC AAAAGAGGGG TAGGATATTA TTTCAACAAA TTAAGTTAA
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Protein sequence | MSAKILVVDD EKNIVDILKF NLAKEGFSTL EANDGEQAIE LALSEKPDLI LLDIMLPKLD GFTVCRKLRE SISTPIIMIT AKEEEVDKVL GLELGADDYI TKPFSTRELM ARVKANLRRV ASSAETQKKQ SNYLKFGDLE IDIEHYEVRR NNEVIELTLR EFELVKFLAL QPGQIFSRET LLEKVWGYEY YGDVRTVDVT VRRVREKIEK DPSNPCYIMT KRGVGYYFNK LS
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