Gene Cthe_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2333 
Symbol 
ID4809261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2780172 
End bp2780870 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content41% 
IMG OID640107740 
Producttwo component transcriptional regulator 
Protein accessionYP_001038728 
Protein GI125974818 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGA AAATCCTTGT TGTTGATGAC GAGAAAAATA TAGTTGACAT TCTCAAATTT 
AATTTGGCAA AAGAGGGTTT TTCCACGCTT GAAGCAAATG ACGGCGAACA AGCTATTGAA
CTTGCGCTAA GTGAAAAGCC GGATTTGATA CTGCTGGACA TAATGCTTCC CAAATTGGAC
GGCTTTACCG TTTGCCGCAA ATTGAGGGAA AGTATATCCA CTCCCATTAT AATGATTACT
GCAAAGGAAG AGGAAGTTGA CAAGGTATTG GGATTGGAGC TTGGAGCGGA TGATTATATA
ACAAAGCCTT TCAGCACGAG GGAGCTGATG GCGAGAGTAA AAGCCAATTT AAGAAGGGTT
GCTTCCTCTG CGGAGACTCA AAAGAAGCAA AGCAATTATT TGAAATTCGG AGACTTGGAG
ATAGATATCG AACATTATGA AGTAAGAAGA AACAATGAGG TAATTGAGCT GACATTAAGG
GAATTTGAAC TTGTAAAATT CCTGGCATTG CAGCCGGGCC AGATATTTTC AAGGGAGACC
CTTTTGGAAA AGGTCTGGGG TTATGAATAT TACGGCGACG TCCGTACGGT GGATGTGACT
GTAAGAAGAG TGAGGGAGAA GATTGAAAAG GATCCGAGCA ATCCTTGCTA CATTATGACC
AAAAGAGGGG TAGGATATTA TTTCAACAAA TTAAGTTAA
 
Protein sequence
MSAKILVVDD EKNIVDILKF NLAKEGFSTL EANDGEQAIE LALSEKPDLI LLDIMLPKLD 
GFTVCRKLRE SISTPIIMIT AKEEEVDKVL GLELGADDYI TKPFSTRELM ARVKANLRRV
ASSAETQKKQ SNYLKFGDLE IDIEHYEVRR NNEVIELTLR EFELVKFLAL QPGQIFSRET
LLEKVWGYEY YGDVRTVDVT VRRVREKIEK DPSNPCYIMT KRGVGYYFNK LS