Gene Hore_21640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21640 
Symbol 
ID7313712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2356669 
End bp2357349 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content40% 
IMG OID643612617 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002509905 
Protein GI220932997 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000176926 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA TACTGGTTAT AGATGATGAA GAGAATATCA GGGAGCTTAT TAAATTTAAT 
TTAGAGACGG CAGGTTACAG GGTAGAACTG GCCGCTGATG GAGAAGAAGG TTGGGACAGG
TTGAATGATT CCATAGATTT GATTATCCTT GACTTAATGT TGCCCCGGAT TGATGGACTG
AGCTTCTGCC GGCAGGTCAG GTCCAATAAC CGATTTAAAG ATATTCCCAT AATCATGTTA
ACTGCTAAAG GGGAAGAAGT GGACAAAATT ATTGGGTTAG AAATGGGAGC AGATGATTAT
ATAACCAAAC CCTTTAGCCC CCGGGAACTG GTTGCCAGGA TTAAGGCCGT GCTCCGCAGA
GTGCAAAAGA ATGAAGAAAA GAGTGATAAT GAGTTAATAA AAAAAGCTGA TTTTGAATTA
GATGTATCCA GTCATGAAGC CCGTAAGGGA GGGGAGGTTT TAAACTTAAC CCCTAAAGAA
TTTGATTTAT TGCGTCATCT ACTGGTAAAT TCGGGTAAGG TATTAACCCG TGATATTCTA
CTTGAAAAAG TCTGGGGCTA TGAATATGCA GGGGATACCA GAACTGTTGA TGTTCATATA
AGGAGGTTAA GAAGAAAGAT CGGGGATAAT TATATTGTTA CCGTGAGAGG GGTGGGGTAT
AAATTTGTTA AACTGGAATG A
 
Protein sequence
MEKILVIDDE ENIRELIKFN LETAGYRVEL AADGEEGWDR LNDSIDLIIL DLMLPRIDGL 
SFCRQVRSNN RFKDIPIIML TAKGEEVDKI IGLEMGADDY ITKPFSPREL VARIKAVLRR
VQKNEEKSDN ELIKKADFEL DVSSHEARKG GEVLNLTPKE FDLLRHLLVN SGKVLTRDIL
LEKVWGYEYA GDTRTVDVHI RRLRRKIGDN YIVTVRGVGY KFVKLE