More than 300 homologs were found in PanDaTox collection
for query gene Cpha266_0880 on replicon NC_008639
Organism: Chlorobium phaeobacteroides DSM 266



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008639  Cpha266_0880  two component transcriptional regulator  100 
 
 
236 aa  474  1e-133  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  83.12 
 
 
233 aa  390  1e-108  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  78.21 
 
 
236 aa  378  1e-104  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  76.75 
 
 
236 aa  358  6e-98  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  75.32 
 
 
236 aa  352  4e-96  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  72.77 
 
 
236 aa  350  8e-96  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  71.81 
 
 
253 aa  336  1.9999999999999998e-91  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  52.7 
 
 
226 aa  242  3.9999999999999997e-63  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  52.7 
 
 
236 aa  240  1e-62  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  52.91 
 
 
225 aa  236  2e-61  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  53.15 
 
 
225 aa  234  1.0000000000000001e-60  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  50.88 
 
 
225 aa  231  7.000000000000001e-60  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  50.88 
 
 
225 aa  231  8.000000000000001e-60  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  51.57 
 
 
226 aa  230  1e-59  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  51.34 
 
 
243 aa  230  1e-59  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  50 
 
 
226 aa  229  2e-59  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  50.67 
 
 
226 aa  229  3e-59  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  50.66 
 
 
230 aa  228  6e-59  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  50.22 
 
 
225 aa  226  2e-58  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  49.78 
 
 
230 aa  225  4e-58  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  49.78 
 
 
230 aa  225  5.0000000000000005e-58  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  47.6 
 
 
230 aa  221  8e-57  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  48.68 
 
 
227 aa  221  8e-57  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  48.03 
 
 
229 aa  220  1.9999999999999999e-56  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  47.79 
 
 
231 aa  216  2e-55  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  48.67 
 
 
227 aa  217  2e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  50.22 
 
 
228 aa  216  2.9999999999999998e-55  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  46.72 
 
 
229 aa  211  7.999999999999999e-54  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  51.12 
 
 
225 aa  211  7.999999999999999e-54  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  47.75 
 
 
226 aa  211  1e-53  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  47.96 
 
 
228 aa  208  6e-53  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  47.32 
 
 
235 aa  208  6e-53  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  47.6 
 
 
230 aa  206  3e-52  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  44.16 
 
 
230 aa  203  2e-51  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  46.29 
 
 
238 aa  201  9.999999999999999e-51  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  47.16 
 
 
235 aa  201  9.999999999999999e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  47.06 
 
 
234 aa  199  1.9999999999999998e-50  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  49.33 
 
 
256 aa  198  7e-50  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  47.56 
 
 
226 aa  197  1.0000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  45.76 
 
 
233 aa  197  1.0000000000000001e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  48 
 
 
230 aa  196  4.0000000000000005e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  44.89 
 
 
226 aa  195  4.0000000000000005e-49  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  45 
 
 
239 aa  195  4.0000000000000005e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  42.86 
 
 
231 aa  195  5.000000000000001e-49  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  45.26 
 
 
239 aa  194  1e-48  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  44.69 
 
 
229 aa  194  1e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  45.26 
 
 
239 aa  194  1e-48  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  48.03 
 
 
227 aa  194  1e-48  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  45.33 
 
 
226 aa  193  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  46.7 
 
 
229 aa  193  2e-48  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  42.36 
 
 
236 aa  193  2e-48  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  46.26 
 
 
229 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  43.67 
 
 
229 aa  192  3e-48  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  46.46 
 
 
230 aa  192  4e-48  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  46.49 
 
 
231 aa  192  5e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  43.17 
 
 
223 aa  191  6e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  43.17 
 
 
223 aa  191  6e-48  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  45.45 
 
 
240 aa  191  7e-48  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  46.67 
 
 
226 aa  191  8e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  43.97 
 
 
230 aa  191  1e-47  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  43.17 
 
 
223 aa  189  2e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  43.17 
 
 
223 aa  190  2e-47  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  43.17 
 
 
223 aa  190  2e-47  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  45.29 
 
 
225 aa  190  2e-47  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  45.37 
 
 
225 aa  190  2e-47  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  43.4 
 
 
238 aa  189  2.9999999999999997e-47  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  44.54 
 
 
230 aa  189  2.9999999999999997e-47  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  46.88 
 
 
225 aa  189  2.9999999999999997e-47  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  42.73 
 
 
223 aa  189  4e-47  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.49 
 
 
240 aa  188  5e-47  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  43.17 
 
 
223 aa  188  5e-47  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  43.17 
 
 
223 aa  188  5e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  45.81 
 
 
234 aa  188  5e-47  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  43.36 
 
 
229 aa  188  5e-47  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  42.36 
 
 
231 aa  188  5.999999999999999e-47  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  42.73 
 
 
223 aa  188  7e-47  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  45.18 
 
 
229 aa  188  7e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  46.55 
 
 
236 aa  188  8e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  43.17 
 
 
223 aa  188  8e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  41.88 
 
 
236 aa  187  1e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  46.15 
 
 
232 aa  187  1e-46  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  45.06 
 
 
236 aa  187  1e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  46.88 
 
 
229 aa  187  1e-46  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  43.11 
 
 
226 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  44.16 
 
 
250 aa  186  2e-46  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  44.16 
 
 
238 aa  186  2e-46  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  44.16 
 
 
238 aa  186  2e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  44.16 
 
 
238 aa  186  2e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  44.16 
 
 
250 aa  186  2e-46  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  45.45 
 
 
230 aa  186  2e-46  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  44.16 
 
 
238 aa  186  2e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  43.24 
 
 
225 aa  187  2e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_011729  PCC7424_2845  two component transcriptional regulator, winged helix family  43.29 
 
 
234 aa  187  2e-46  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  44.16 
 
 
250 aa  186  2e-46  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  44.16 
 
 
238 aa  186  3e-46  Bacillus cereus G9842  Bacteria  normal  hitchhiker  3.95849e-16 
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  44.16 
 
 
238 aa  186  3e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  47.98 
 
 
236 aa  186  3e-46  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  44.16 
 
 
238 aa  186  3e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  45.41 
 
 
236 aa  186  4e-46  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  43.53 
 
 
239 aa  185  6e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>