Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0580 |
Symbol | |
ID | 8881763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 610524 |
End bp | 611204 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003509387 |
Protein GI | 291298109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCGCG TACTCGTAGT CGAAGACGAG GAATCGTTCT CCGACGCGCT TTCGTACATG CTGCGCAAGG AGGGCTTCGA AGTGGCGGTC GCCGCCACCG GAAACGAGGC TCTCAAGGAA TATGAGAAGG CCGGAGCCGA CATCGTCCTG CTGGACCTGA TGCTGCCGGA GAAGTCGGGA ACCGAGGTGT GCCGCGAACT ACGCACCACG TCCAATGTGC CCATCATCAT GGTGACCGCG CGCGACAGCG AGGTCGACAA GGTCGTGGGG CTGGAGATCG GCGCCGACGA CTACATCACC AAGCCCTACT CGCCCCGCGA GCTCGTCGCC CGGATCCGCG CGGTGCTGCG CCGCAACGCC GAACCCACCG ACCCGATGGT GACGGTGCTG GAATCCGGCC CGGTGCGCAT GGACGTCGAC CGGCACGTGG TGTCGGTGGG CGGCGCCGAG ATCCCGTTGC CGCTCAAGGA GTTCGAGCTG CTCGAGATGT TCCTGCGCAA CTCCGGCCGA GTGCTGACCC GCGGCCAGCT CATCGACCGC GTCTGGGGCG CCGACTACGT CGGCGACACC AAGACCCTCG ACGTGCACGT GAAACGGCTG CGCTCCAAGA TCGAGACCGA GCCCGGTCGT CCCCGCCACC TCGTGACCGT TCGGGGCCTG GGCTACAAGT TCGAGTCCTA G
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Protein sequence | MTRVLVVEDE ESFSDALSYM LRKEGFEVAV AATGNEALKE YEKAGADIVL LDLMLPEKSG TEVCRELRTT SNVPIIMVTA RDSEVDKVVG LEIGADDYIT KPYSPRELVA RIRAVLRRNA EPTDPMVTVL ESGPVRMDVD RHVVSVGGAE IPLPLKEFEL LEMFLRNSGR VLTRGQLIDR VWGADYVGDT KTLDVHVKRL RSKIETEPGR PRHLVTVRGL GYKFES
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