| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0080 |
|---|
| Symbol | |
|---|
| ID | 7407317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 101620 |
|---|
| End bp | 102312 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643714490 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002572013 |
|---|
| Protein GI | 222528131 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAG CACATATTCT TGTTGTTGAC GATGAAAAAC CAATTGTTGA TATTATAAAG
TTCAATTTAG AAAAAGAAGG ATATAAGGTA ACAGCGTCAT ATGACGGTGA GGATGCGTTA
AATAGAATAA AAAATGAAAA CTTTGACATG GTACTTCTGG ATGTGATGCT TCCTAAACTT
GACGGGTTTT CTGTATGCAA AAAGGTCCGT GAGTTTTCAG ATGTCCCAAT TATAATGATA
ACAGCGAAGG CTGATGAGGT TGACAAGGTT TTGGGGCTGG AGCTTGGGGC AGATGATTAC
ATAACAAAAC CGTTTGGTAT AAGAGAGCTC ATTGCCAGAA TTAGAGCAAA TTTAAGAAGG
ACAGCTCAAA GCGCAGCTCA AGATGGAAAG GTATTAAAAG CTGGGAATTT GACTTTGAAC
CCTGAGACGT TTGAAGTAAA GAAAGACGGC AAAGTTATTG AACTTACCGT AAGAGAATAT
GAGCTTTTGA AGTTTTTGAT GTCGCAAAAG GGTCAGGTAT TTTCAAGAGA AGAGCTTTTG
GAAAAGGTTT GGGACTATGA ATATTATGGA GATGTTAGAA CAGTAGATGT TACTGTAAGA
AGATTGAGAG AAAAAATAGA AGATAATCCA TCAGAACCGA ATTTTATTCT TACAAAGAGA
GGAATTGGCT ACTACTTTAA TCCCAATATT TAA
|
|---|
| Protein sequence | MSKAHILVVD DEKPIVDIIK FNLEKEGYKV TASYDGEDAL NRIKNENFDM VLLDVMLPKL
DGFSVCKKVR EFSDVPIIMI TAKADEVDKV LGLELGADDY ITKPFGIREL IARIRANLRR
TAQSAAQDGK VLKAGNLTLN PETFEVKKDG KVIELTVREY ELLKFLMSQK GQVFSREELL
EKVWDYEYYG DVRTVDVTVR RLREKIEDNP SEPNFILTKR GIGYYFNPNI
|
|---|
| |