Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4322 |
Symbol | |
ID | 9248197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5155968 |
End bp | 5156663 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003682217 |
Protein GI | 297563243 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGCG TACTCGTTGT CGAGGACGAG GAATCCTACA GCGACGCCCT GTCGTACATG CTGCGCAAGG AGGGCTTCGA GGTCGCCGTG GCGCCCACCG GGACCGTGGC GTTGGAGACC TTCGACCGTA CCGGGGCCGA CCTGGTGCTG CTGGACCTGA TGCTGCCGGG GCTGTCGGGC ACCGAGGTGT GCCGGACGCT GCGGCAGAAG TCCAACGTCC CCGTGATCAT GCTCACCGCC AAGGACTCCG AGATCGACAA GGTCGTCGGT CTGGAGCTGG GCGCCGACGA CTACGTGACC AAGCCCTTCT CCTCCCGCGA GCTGGTGGCC CGCATCCGCG CGGTGCTGCG CCGCCGGGGC GAGGACGAGG TCGTGCTGCC CGCCGCCCTG GAGGCCGGTC CCGTCCGGAT GGACGTGGAG CGGCACGTGG TGACGGTGCG CGGCGACAAC GTGCAGCTCC CCCTCAAGGA GTTCGAGCTG CTGGAGGTGC TCCTGCGCAA CGCCGGGCGG GTGCTCACCA GGATGCAGCT CATCGACCGC GTGTGGGGCG CCGACTACGT CGGTGACACC AAGACCCTCG ACGTGCACGT CAAGAGGCTG CGCGCCAAGA TCGAGGAGGA CCCCGGCAGC CCGCGCTACA TCGTGACCGT CCGCGGTCTG GGCTACAAGT TCGAGCCGGT GACCGTCGAC GTCTGA
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Protein sequence | MTRVLVVEDE ESYSDALSYM LRKEGFEVAV APTGTVALET FDRTGADLVL LDLMLPGLSG TEVCRTLRQK SNVPVIMLTA KDSEIDKVVG LELGADDYVT KPFSSRELVA RIRAVLRRRG EDEVVLPAAL EAGPVRMDVE RHVVTVRGDN VQLPLKEFEL LEVLLRNAGR VLTRMQLIDR VWGADYVGDT KTLDVHVKRL RAKIEEDPGS PRYIVTVRGL GYKFEPVTVD V
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