More than 300 homologs were found in PanDaTox collection
for query gene Ndas_4322 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  100 
 
 
231 aa  455  1e-127  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  92.04 
 
 
230 aa  416  9.999999999999999e-116  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  87.17 
 
 
226 aa  387  1e-107  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  86.28 
 
 
229 aa  387  1e-106  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  86.67 
 
 
229 aa  385  1e-106  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  80 
 
 
226 aa  368  1e-101  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  83.56 
 
 
226 aa  365  1e-100  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  80 
 
 
226 aa  362  3e-99  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  78.67 
 
 
226 aa  361  5.0000000000000005e-99  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  81.42 
 
 
228 aa  361  6e-99  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  78.32 
 
 
226 aa  359  2e-98  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  77.88 
 
 
226 aa  357  6e-98  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  80 
 
 
225 aa  357  8e-98  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  81.86 
 
 
226 aa  355  2.9999999999999997e-97  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  76.42 
 
 
229 aa  350  1e-95  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  76.89 
 
 
226 aa  348  4e-95  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  75 
 
 
228 aa  342  2.9999999999999997e-93  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  73.45 
 
 
227 aa  338  5.9999999999999996e-92  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_009953  Sare_0404  two component transcriptional regulator  81.58 
 
 
227 aa  337  7e-92  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00316128 
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  74.22 
 
 
226 aa  337  9.999999999999999e-92  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  72.69 
 
 
228 aa  335  2.9999999999999997e-91  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0337  two component transcriptional regulator  80.62 
 
 
227 aa  335  3.9999999999999995e-91  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  72.93 
 
 
229 aa  332  2e-90  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  73.13 
 
 
228 aa  331  6e-90  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  73.13 
 
 
228 aa  331  6e-90  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  73.13 
 
 
228 aa  331  6e-90  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  72.25 
 
 
228 aa  330  8e-90  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_009664  Krad_0896  two component transcriptional regulator, winged helix family  79.56 
 
 
226 aa  329  3e-89  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232326  hitchhiker  0.00518822 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  72.69 
 
 
228 aa  329  3e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  70.89 
 
 
237 aa  327  7e-89  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  74.78 
 
 
229 aa  327  1.0000000000000001e-88  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  67.83 
 
 
226 aa  310  1e-83  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_013521  Sked_31880  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  67.38 
 
 
231 aa  297  7e-80  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  63.48 
 
 
234 aa  295  6e-79  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2969  two component transcriptional regulator, winged helix family  67.21 
 
 
246 aa  294  9e-79  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0657  two component transcriptional regulator, winged helix family  72.29 
 
 
235 aa  289  2e-77  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.118815  hitchhiker  0.000311431 
 
 
-
 
NC_012669  Bcav_0771  two component transcriptional regulator, winged helix family  69.1 
 
 
233 aa  280  1e-74  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.204872  normal  0.13372 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  58.04 
 
 
242 aa  244  6.999999999999999e-64  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  51.1 
 
 
236 aa  234  8e-61  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  49.78 
 
 
232 aa  233  2.0000000000000002e-60  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  52.47 
 
 
235 aa  231  5e-60  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  52.47 
 
 
235 aa  231  7.000000000000001e-60  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  48.66 
 
 
229 aa  230  1e-59  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  52.47 
 
 
235 aa  230  2e-59  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  52.47 
 
 
235 aa  230  2e-59  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  52.47 
 
 
235 aa  230  2e-59  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  52.47 
 
 
235 aa  230  2e-59  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  52.47 
 
 
235 aa  230  2e-59  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  51.75 
 
 
237 aa  230  2e-59  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  52.47 
 
 
235 aa  230  2e-59  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  52.02 
 
 
235 aa  229  2e-59  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  52.47 
 
 
235 aa  230  2e-59  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  52.02 
 
 
235 aa  229  3e-59  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  51.34 
 
 
236 aa  228  8e-59  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  50 
 
 
235 aa  226  3e-58  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  53.88 
 
 
239 aa  225  5.0000000000000005e-58  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  49.14 
 
 
235 aa  224  1e-57  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  50.22 
 
 
230 aa  224  1e-57  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  50.22 
 
 
250 aa  223  3e-57  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  51.5 
 
 
250 aa  221  6e-57  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  49.33 
 
 
238 aa  221  7e-57  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  49.12 
 
 
239 aa  220  9.999999999999999e-57  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  49.11 
 
 
233 aa  220  9.999999999999999e-57  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  49.78 
 
 
235 aa  220  9.999999999999999e-57  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  49.11 
 
 
233 aa  220  9.999999999999999e-57  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  49.12 
 
 
239 aa  220  9.999999999999999e-57  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  48.92 
 
 
234 aa  219  1.9999999999999999e-56  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  47.41 
 
 
232 aa  219  1.9999999999999999e-56  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  49.56 
 
 
233 aa  219  3e-56  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  50.44 
 
 
237 aa  218  5e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  48 
 
 
256 aa  218  7.999999999999999e-56  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  49.38 
 
 
237 aa  218  8.999999999999998e-56  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  48.02 
 
 
230 aa  217  1e-55  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2657  two component transcriptional regulator, winged helix family  48.26 
 
 
250 aa  217  1e-55  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.350713 
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  50.88 
 
 
230 aa  217  1e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  50.45 
 
 
231 aa  217  1e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_011726  PCC8801_3460  two component transcriptional regulator, winged helix family  48.26 
 
 
250 aa  217  1e-55  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_2903  two component transcriptional regulator, winged helix family  47.35 
 
 
234 aa  216  2.9999999999999998e-55  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  47.39 
 
 
236 aa  215  4e-55  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  47.11 
 
 
230 aa  215  4e-55  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  48.43 
 
 
237 aa  215  5e-55  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  50.45 
 
 
228 aa  214  8e-55  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  49.34 
 
 
235 aa  214  9e-55  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  49.13 
 
 
238 aa  213  9.999999999999999e-55  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  47.37 
 
 
239 aa  214  9.999999999999999e-55  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  49.56 
 
 
233 aa  214  9.999999999999999e-55  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  49.34 
 
 
230 aa  213  1.9999999999999998e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  46.29 
 
 
232 aa  213  1.9999999999999998e-54  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  46.22 
 
 
230 aa  213  1.9999999999999998e-54  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  46.26 
 
 
230 aa  213  2.9999999999999995e-54  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  50.22 
 
 
231 aa  213  2.9999999999999995e-54  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  51.09 
 
 
235 aa  213  2.9999999999999995e-54  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.56 
 
 
240 aa  213  2.9999999999999995e-54  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  47.14 
 
 
239 aa  212  2.9999999999999995e-54  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_010718  Nther_0984  two component transcriptional regulator, winged helix family  45.27 
 
 
246 aa  212  3.9999999999999995e-54  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.0723779 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  49.12 
 
 
236 aa  212  4.9999999999999996e-54  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  48.05 
 
 
226 aa  211  7e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  48.23 
 
 
231 aa  211  7.999999999999999e-54  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  49.56 
 
 
236 aa  211  7.999999999999999e-54  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_011729  PCC7424_3600  two component transcriptional regulator, winged helix family  46.52 
 
 
250 aa  210  1e-53  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00284005 
 
 
-
 
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