| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3818 |
|---|
| Symbol | |
|---|
| ID | 5210800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4776811 |
|---|
| End bp | 4777503 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640597414 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001278122 |
|---|
| Protein GI | 148657917 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.386967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.165932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATGT CCACCATTCT GCTGGTAGAG GATGATCCGA TCCTTTCAGA AACGTTACGC
TACAATCTGG AACGGGAAGG GTACGCGGTC ATCAACGCTC CTGACGGCGT TGTCGGTCTG
GAACGGGCGC GACGCGATCA ACCCGATATG GTCATTCTCG ATGTGATGCT CCCCCGTCTG
GATGGATTTT CCGTCTGTCG CATTCTGCGC CAGGAGAGCG AAGTTCCCAT CCTGATCCTG
ACGGCGCGAC AGGACGAGAT TGATCGCATC GCAGGGCTGG AGTTGGGCGC CGATGATTAC
GTTGCCAAGC CATTCAGCCT CGGAGAACTG CTGGCGCGGG TGCGGGCGAT TATGCGCCGC
TCAGATCGCC GCATCAGTGC GCTGCGTGAG GTGCTCGACG CTGGCGCGAT CCGGTTGGAT
ACCGGCTCAC GGCGCGCCTG GCGCGATGAT GTCGAACTGA ACCTGTCCCA GAAAGAGTTC
GATCTGCTGG CATGCCTGAT GCGCAACCGC GGCATCGCGT TGTCGCGTGA TGTCCTGCTC
GAGCGCGTCT GGGGGTACGA CTTCCTCGGC GATAGCCGGA CGGTCGATGT GCACATTCGC
TGGTTGCGCG AGAAGGTTGA ACCCGACCCC GGCAAGCCGA CCTATATTCA GACGGTTCGC
GGCATTGGCT ATCGTTTCGA GGCGCCAGAC TGA
|
|---|
| Protein sequence | MHMSTILLVE DDPILSETLR YNLEREGYAV INAPDGVVGL ERARRDQPDM VILDVMLPRL
DGFSVCRILR QESEVPILIL TARQDEIDRI AGLELGADDY VAKPFSLGEL LARVRAIMRR
SDRRISALRE VLDAGAIRLD TGSRRAWRDD VELNLSQKEF DLLACLMRNR GIALSRDVLL
ERVWGYDFLG DSRTVDVHIR WLREKVEPDP GKPTYIQTVR GIGYRFEAPD
|
|---|
| |