Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0105 |
Symbol | |
ID | 4415764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 97963 |
End bp | 98676 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639668370 |
Product | DNA-binding response regulator |
Protein accession | YP_809765 |
Protein GI | 116490221 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA TTCTTGTTGT CGACGATGAG AAGCCAATTT CAGACGTTAT CAAATTTAAT TTACAAAAAG AAGGTTACGA TGTCGTGACA GCTTTTGACG GGCGGGAAGC TTTGGAAGTT TTTGCTTCCG AGAATCCAGA CCTTGTTTTG CTGGACCAAA TGCTTCCGGA AATCGAGGGA ACTGAGGTTC TTCGTCAAAT TCGTTCCAAC TCTTCGACGC CGGTAATTAT TGTAACGGCA AAAGACAGTG AGATCGATAA AGTTGTCGGC CTTGAAATGG GCGCTGATGA TTATGTGACC AAACCTTTTT CAAATCGTGA ATTAGTTGCT CGTGTTAAGG CTAATTTACG TCGCCAGGAT GCGACTCTGC CTGGTGTTGA CGCATCTGGC GATCATTCGC AAAAGGAGAT TAAAGTTGCC GATTTGATCA TTCGACCGGA TGCCTATACG GTTACTAAAA ACGGAATTGA TCTCGATTTA ACTCATCGTG AGTTTGACCT TCTTCATTAT CTGGCCCGCC GTCCCGGACA AGTGCTGACT CGTGAGGCCC TCTTGACCGA GGTATGGGGC TTTGATTACT TTGGCGATGT TCGGACGGTC GATGTGACTG TTCGCCGTTT GCGCGAAAAA GTTGAGGACT CGCCCAGCCG TCCTGAAATT TTAATGACTA AACGCGGTGT TGGTTATTTC ATTAAACCAG ATAGTGTTCA TTAA
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Protein sequence | MSKILVVDDE KPISDVIKFN LQKEGYDVVT AFDGREALEV FASENPDLVL LDQMLPEIEG TEVLRQIRSN SSTPVIIVTA KDSEIDKVVG LEMGADDYVT KPFSNRELVA RVKANLRRQD ATLPGVDASG DHSQKEIKVA DLIIRPDAYT VTKNGIDLDL THREFDLLHY LARRPGQVLT REALLTEVWG FDYFGDVRTV DVTVRRLREK VEDSPSRPEI LMTKRGVGYF IKPDSVH
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