| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1950 |
|---|
| Symbol | |
|---|
| ID | 4423663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1923409 |
|---|
| End bp | 1924116 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639675645 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | YP_819394 |
|---|
| Protein GI | 116619023 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.100456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TATTAGTTGT GGACGATGAA AAACCGATTT CTGATATTAT TAAATTTAAC
CTAACCAAAG AAGGCTACGA TGTAGTCACC GCTGCGGATG GGCAAGAAGC ATTAGATATG
TATAATGATG AAAATCCTGA TTTGGTTTTA CTAGATCAGA TGTTACCAGA AGTAGATGGT
ATCGAGGTTT TGCGTCAAAT CCGTTCTAAG TCAGATGTGC CTGTCATCAT GGTGACCGCT
AAGGATAGTG AGATTGATAA GGTTCTTGGT TTAGAAATGG GAGCCGATGA TTATGTAACT
AAACCATTTT CTAATCGTGA ATTGGTTGCA CGAGTTAAGG CTAATTTGCG AAGTCGAAAG
TCTGTTTCGC AAACTTCTGA AGAGACTTTT AATAGTACAG AAGATATTCA CTTAGGTGAT
TTAGTAATCC ATCCCCAAGC CTATATGGTT TCAAAGGATG GTGCTGATAT TGAGTTAACG
CATCGTGAAT TTGAATTATT ATATTATTTA GCACAACATA TTGGACAGGT GATGACACGT
GAACACTTGT TACAGCAAGT TTGGGGCTAT GATTATTTTG GTGACGTACG TACAGTAGAT
GTTACGGTTC GACGATTACG TGAGAAAATT GAAGACAATC CTAGCCATCC TAATTGGCTA
GCAACACGCC GTGGCGTCGG ATATTATTTA CGCCCATCAG AAGAATAA
|
|---|
| Protein sequence | MSKVLVVDDE KPISDIIKFN LTKEGYDVVT AADGQEALDM YNDENPDLVL LDQMLPEVDG
IEVLRQIRSK SDVPVIMVTA KDSEIDKVLG LEMGADDYVT KPFSNRELVA RVKANLRSRK
SVSQTSEETF NSTEDIHLGD LVIHPQAYMV SKDGADIELT HREFELLYYL AQHIGQVMTR
EHLLQQVWGY DYFGDVRTVD VTVRRLREKI EDNPSHPNWL ATRRGVGYYL RPSEE
|
|---|
| |