Gene Caci_8215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8215 
Symbol 
ID8339594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9527020 
End bp9527700 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID644961301 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003118879 
Protein GI256397315 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGTG TACTCGTGGT CGAGGACGAG GACTCGATCA GCGACCCCCT GTCCTACATG 
CTGCGCAACG AGGGCTTCGA GGTGGCGGTC GCCGACACCG GCCCGGCCGC GCTGGAGGAG
TTCGACCGGC ACGGCGCCGA CCTGGTGCTG CTGGACCTGA TGCTGCCCGG GCTGCCCGGG
ACCGAGGTCT GCCGGCAGAT CCGGGCCAAG TCCAACGTCC CGGTGATCAT GCTGACCGCC
AAGGACAGCG AGATCGACAA GGTCGTCGGC CTGGAGCTGG GCGCCGACGA CTACGTCACC
AAGCCTTTCT CGGCCCGCGA ACTGGTGGCC CGCATCCGTG CGGTGCTGCG CCGGCAGGCG
GCCAGCGACG AGCCGGACGG CGGCGCGCTG GAGGCCGGCC CGGTCCGGAT GGACGTGGAC
CGGCACAAGG TGACGGTCGA CGGCCGCCCC GTCGAGCTGC CGCTGAAGGA GTTCGAGCTG
CTGGAGATGC TGCTGCGCAA CTCCGGCCGG GTGCTGACCC GGATGCAGCT GATCGACCGG
GTGTGGGGCG CGGACTACGT CGGCGACACC AAGACGCTGG ACGTGCACGT CAAGCGCCTG
CGCGCGAAGA TCGAGCCGGA CCCGGGCACG CCGGTGCACC TGGTGACGGT GCGCGGGCTC
GGGTACAAGT TCGAGGGCTG A
 
Protein sequence
MTRVLVVEDE DSISDPLSYM LRNEGFEVAV ADTGPAALEE FDRHGADLVL LDLMLPGLPG 
TEVCRQIRAK SNVPVIMLTA KDSEIDKVVG LELGADDYVT KPFSARELVA RIRAVLRRQA
ASDEPDGGAL EAGPVRMDVD RHKVTVDGRP VELPLKEFEL LEMLLRNSGR VLTRMQLIDR
VWGADYVGDT KTLDVHVKRL RAKIEPDPGT PVHLVTVRGL GYKFEG