Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6749 |
Symbol | |
ID | 8330965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7882476 |
End bp | 7883156 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644947178 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003104392 |
Protein GI | 256380732 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.290774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAGGG TGCTCATCGT GGAGGACGAG GAGTCCTTCG CCGATCCGCT CGCCTTCCTG CTCCGCAAGG AGGGCTTCAC CGCCGCGCTG GCCGCCACCG GCCCCGAGGC GCTGGAGGAG TTCGACCGCA ACGGCGCCGA CATCGTCCTG CTCGACCTGA TGCTCCCCGG CATGAGCGGC ACCGACGTCT GCAAGCAGCT GCGCCAGCGC TCGGCCGTCC CGGTGATCAT GGTCACGGCG CGGGACAGCG AGATCGACAA GGTGGTCGGG CTGGAGCTCG GCGCCGACGA CTACGTCACC AAGCCCTACT CCGCGCGCGA GCTGATCGCC CGGATCCGCG CCGTGCTGCG CCGCGGCGGC GAGTCCGAGG AGCTGTTGCC GCAGGTCCTG GAGGCGGGGC CGGTCCGGAT GGACGTCGAG CGGCACGTCG TGACTGTCAA CGGTGAAGAA GTCGCGCTGC CCCTCAAGGA GTTCGACCTG CTGGAGTACC TCCTGCGCAA CGTGGGCCGG GTGCTCACGC GCGGTCAGCT CATCGACCGG GTGTGGGGCG CGGACTACGT CGGTGATACG AAGACGCTGG ACGTGCACGT CAAGCGGCTC AGGTCCAAGG TCGAGCCCGA CCCCGCCACC CCCCGTCACC TGGTTACCGT GCGAGGTCTG GGCTACAAGT TCGAGTCCTG A
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Protein sequence | MTRVLIVEDE ESFADPLAFL LRKEGFTAAL AATGPEALEE FDRNGADIVL LDLMLPGMSG TDVCKQLRQR SAVPVIMVTA RDSEIDKVVG LELGADDYVT KPYSARELIA RIRAVLRRGG ESEELLPQVL EAGPVRMDVE RHVVTVNGEE VALPLKEFDL LEYLLRNVGR VLTRGQLIDR VWGADYVGDT KTLDVHVKRL RSKVEPDPAT PRHLVTVRGL GYKFES
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