Gene Amir_6749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6749 
Symbol 
ID8330965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7882476 
End bp7883156 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID644947178 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003104392 
Protein GI256380732 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.290774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGGG TGCTCATCGT GGAGGACGAG GAGTCCTTCG CCGATCCGCT CGCCTTCCTG 
CTCCGCAAGG AGGGCTTCAC CGCCGCGCTG GCCGCCACCG GCCCCGAGGC GCTGGAGGAG
TTCGACCGCA ACGGCGCCGA CATCGTCCTG CTCGACCTGA TGCTCCCCGG CATGAGCGGC
ACCGACGTCT GCAAGCAGCT GCGCCAGCGC TCGGCCGTCC CGGTGATCAT GGTCACGGCG
CGGGACAGCG AGATCGACAA GGTGGTCGGG CTGGAGCTCG GCGCCGACGA CTACGTCACC
AAGCCCTACT CCGCGCGCGA GCTGATCGCC CGGATCCGCG CCGTGCTGCG CCGCGGCGGC
GAGTCCGAGG AGCTGTTGCC GCAGGTCCTG GAGGCGGGGC CGGTCCGGAT GGACGTCGAG
CGGCACGTCG TGACTGTCAA CGGTGAAGAA GTCGCGCTGC CCCTCAAGGA GTTCGACCTG
CTGGAGTACC TCCTGCGCAA CGTGGGCCGG GTGCTCACGC GCGGTCAGCT CATCGACCGG
GTGTGGGGCG CGGACTACGT CGGTGATACG AAGACGCTGG ACGTGCACGT CAAGCGGCTC
AGGTCCAAGG TCGAGCCCGA CCCCGCCACC CCCCGTCACC TGGTTACCGT GCGAGGTCTG
GGCTACAAGT TCGAGTCCTG A
 
Protein sequence
MTRVLIVEDE ESFADPLAFL LRKEGFTAAL AATGPEALEE FDRNGADIVL LDLMLPGMSG 
TDVCKQLRQR SAVPVIMVTA RDSEIDKVVG LELGADDYVT KPYSARELIA RIRAVLRRGG
ESEELLPQVL EAGPVRMDVE RHVVTVNGEE VALPLKEFDL LEYLLRNVGR VLTRGQLIDR
VWGADYVGDT KTLDVHVKRL RSKVEPDPAT PRHLVTVRGL GYKFES