| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1490 |
|---|
| Symbol | |
|---|
| ID | 5452153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1618319 |
|---|
| End bp | 1619038 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640875263 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001410990 |
|---|
| Protein GI | 154250165 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000120928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA AAACGATTAT GATTATTGAT GACCAACCAG AGATTCTGGA ATTGGTAAGT
TTTACGTTAC AGAAAGAAGG ATACGACGTT ATCCCTGCAG AAGATGCTGA GAAAGCTCTT
CAAGAATTAA AAGAAAAAGA TGTAGATATG TTTATAGTCG ATATAATGCT TCCAAATATG
GACGGCTTCG AATTTGTTAG GACAATAAGA GCTAAAGACA AACATAAGTT AACGCCTGTT
ATCTTCCTTA GTGCAAAAGG TGAAGAATTT GATAAGGTAC TTGGGTTGGA ACTTGGCGCA
GATGATTACA TAGTAAAACC ATTCAGCGTT AGAGAGCTTC TTGCAAGAAT TAGAGCCGTA
TTTAGAAGAA TGCAACTTGG TACGGTTGTA AAAGAAGAAA AACCGAAGAA AATTGTTGCA
AAAGATTTGG AAATCGATAT AGACAAATAC GAAGTAAGAG TAAAGGGAAA GAAAGTAAGT
CTTACCCCAC TTGAATTTGA CCTCCTAAGA TTCCTTGCCG AAAACGAAGG GAAAGTATTT
TCAAGAGATG TTTTACTTGA CAAACTGTGG GGGTATGACT ACTTCGGCGA TACAAGAACT
GTTGACGTAC ACATAAGAAG ACTCAGAACA AAAATTGAAG ATGATCCATC AAATCCAAGA
TACGTTGTTA CAGTCAGAGG AAAAGGTTAT AAATTTAGAG ACCCAGGAAA GGAAGAATAA
|
|---|
| Protein sequence | MAKKTIMIID DQPEILELVS FTLQKEGYDV IPAEDAEKAL QELKEKDVDM FIVDIMLPNM
DGFEFVRTIR AKDKHKLTPV IFLSAKGEEF DKVLGLELGA DDYIVKPFSV RELLARIRAV
FRRMQLGTVV KEEKPKKIVA KDLEIDIDKY EVRVKGKKVS LTPLEFDLLR FLAENEGKVF
SRDVLLDKLW GYDYFGDTRT VDVHIRRLRT KIEDDPSNPR YVVTVRGKGY KFRDPGKEE
|
|---|
| |