Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2083 |
Symbol | |
ID | 8381242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2275074 |
End bp | 2275787 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645004836 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003162024 |
Protein GI | 256833297 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.873655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGCA TCCTTGTTGT CGAAGATGAA GAGTCATACC GTGAGCCGTT GACTTACCAA CTGACCCGGG AAGGGTACGA CGTTGTGGCG GTAGCAACAG GAACTGAAGC CCTGAGTGCC TACGACGATG AACAACCTGA CCTTGTCCTT CTTGACCTGA TGTTGCCGGG TTTGTCCGGA ACGGAGGTGT GCCGGGAGCT ACGGTCACGC GGTGATGTCC CTGTCATTAT GTTGACGGCA AAGGACGGCG AGATTGACAA GGTTGTGGGG TTGGAACTTG GTGCAGACGA CTACGTGACA AAGCCCTACT CGTTCCGTGA ATTACTGGCA CGGATGCGAG CGGTGCTTCG ACGCCACACC AGTGCAAGCG CATCCGAATC CACTGACTTC CGTGATGACG ACGACGATCA AGTTCTTCAC GCTGGCCCTG TAGCGATGGA TGTCGAACGG CACGTTGTCA CTGTTCGGGG GGACAGCGTG GCGTTTCCAT TGAAGGAGTT TGATCTCCTG GAATACCTGC TCCGTAACGC TGGTCGCGTC CTCACTCGAG GGCAACTCAT TGACCGCGTC TGGGGGAGCG ACTACGTGGG TGACACCAAA ACCCTCGACG TGCACATTAA ACGGATCAGA GCCAAGATCG AAGAAGACCC GGGTAGCCCG CAACTCATCC TTACCGTCCG GGGACTTGGC TATAAATTTG CCGATGTGAG CTGA
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Protein sequence | MTRILVVEDE ESYREPLTYQ LTREGYDVVA VATGTEALSA YDDEQPDLVL LDLMLPGLSG TEVCRELRSR GDVPVIMLTA KDGEIDKVVG LELGADDYVT KPYSFRELLA RMRAVLRRHT SASASESTDF RDDDDDQVLH AGPVAMDVER HVVTVRGDSV AFPLKEFDLL EYLLRNAGRV LTRGQLIDRV WGSDYVGDTK TLDVHIKRIR AKIEEDPGSP QLILTVRGLG YKFADVS
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