Gene Tpet_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1136 
Symbol 
ID5170402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1158457 
End bp1159176 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID640563655 
Producttwo component transcriptional regulator 
Protein accessionYP_001244726 
Protein GI148270266 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000652217 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA AGAAGATTCT GGTGGTTGAC GACGACCCGG CAATTCTCGA GCTGGTAGGA 
TACAACCTTT CCAAAGAAGG ATACGAGGTG CTCAAGGCTT ACGATGGAGA AGAAGCACTC
AAAATTGCCA ACGACGAGGA TGTGGATATG TTCATAGTGG ATATCATGCT TCCTGGAATT
GACGGTTTCG AGCTGGTCAG GAAGATCAGG GCTATAGAGA AATACAAGAA CACCCCCGTG
ATCTTCCTGA GCGCGAAGGG AGAAGAATTC GACAAGGTGC TTGGGCTGGA GCTCGGTGCG
GACGACTACA TCACCAAGCC GTTCAGCGTG AGAGAGCTTC TTGCGAGGGT GAAGGCTATA
TTCAGAAGGC TTTCCACCGC TACTCAGAGC AAGGAAGAAA GGCCTAAGAA GATCATAGCC
AAGGATCTTG AAATCGATGT GGAAAAGTAC GAAGTGAAAG TGAGAGGGAA AAAAGTGAAC
CTCACTCCTC TCGAATTTGA ACTGCTCCGA TTCCTCGCGG AAAACGAAGG AAAAGTTTTC
AGCAGGGATG TTCTCCTTGA TAAACTCTGG GGATACGATT ATTACGGAGA TACGAGAACT
GTAGATGTTC ACATAAGAAG GCTGAGAACG AAGATAGAAG AAGATCCTTC GAATCCGAAA
TACATAATCA CTGTGAGAGG AAAGGGATAC AAATTCAGGG ATCCCGGAAA GGAAGACTGA
 
Protein sequence
MAKKKILVVD DDPAILELVG YNLSKEGYEV LKAYDGEEAL KIANDEDVDM FIVDIMLPGI 
DGFELVRKIR AIEKYKNTPV IFLSAKGEEF DKVLGLELGA DDYITKPFSV RELLARVKAI
FRRLSTATQS KEERPKKIIA KDLEIDVEKY EVKVRGKKVN LTPLEFELLR FLAENEGKVF
SRDVLLDKLW GYDYYGDTRT VDVHIRRLRT KIEEDPSNPK YIITVRGKGY KFRDPGKED