Gene Noca_4046 details

Gene Information

• Locus tag: Noca_4046
• ID: 4596560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4269344
• End bp: 4270021
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639778652
• Product: response regulator receiver
• Protein accession: YP_925230
• Protein GI: 119718265
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCGCG TACTCGTCGT CGAGGACGAA GAGAGCTACA GCGACGCTCT CGCCTACATG 
CTGCGCAAGG AGGGGTACGA GGTCGCCATC GCCGCCAACG GCAACGACGC CCTCACCGAG 
TTCGACCGCA ACGGCGCCGA CATCGTGCTG CTCGACCTGA TGCTCCCGGG GCTGCCCGGC 
ACCGAGGTAT GCCGCCAGAT CCGGCAGACC TCGAGCGTGC CGGTGATCAT GGTCAGCGCC 
AAGGACGACG AGGTCGACAA GGTCGTCGGC CTCGAGCTGG GCGCCGACGA CTACGTCACC 
AAGCCGTACT CGCCACGCGA GCTGGTGGCC CGGATCCGCG CCGTGCTCCG CCGCGGGCAG 
GAGCCCGACC TCGCCCCGCC GACCCTCGAG GCCGGCCCGG TCCGGATGGA CGTCGAGCGG 
CACGTGGTGA CCGTGGACGG CCAGGCCCAG CGGCTGCCGC TCAAGGAGTT CGAGCTGCTG 
GAGATGTTCC TGCGCAACCC CGGCCGGGTG CTCACCCGCG GCCAGCTCAT CGACCGGGTC 
TGGGGCTCCG ACTACGTCGG CGACACCAAG ACCCTCGACG TCCACGTCAA GCGGCTGCGC 
GCCAAGATCG AGCCCGACCC CGGCGAGCCG AGGTACCTGG TCACCGTCCG CGGCCTGGGC 
TACAAGTTCG ACGTCTGA 

 

Protein sequence

MTRVLVVEDE ESYSDALAYM LRKEGYEVAI AANGNDALTE FDRNGADIVL LDLMLPGLPG 
TEVCRQIRQT SSVPVIMVSA KDDEVDKVVG LELGADDYVT KPYSPRELVA RIRAVLRRGQ 
EPDLAPPTLE AGPVRMDVER HVVTVDGQAQ RLPLKEFELL EMFLRNPGRV LTRGQLIDRV 
WGSDYVGDTK TLDVHVKRLR AKIEPDPGEP RYLVTVRGLG YKFDV