Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2534 |
Symbol | yycF |
ID | 3240735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2591085 |
End bp | 2591786 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637169206 |
Product | DNA-binding response regulator YycF |
Protein accession | YP_190075 |
Protein GI | 57865896 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGAA AAGTTGTTGT AGTTGACGAT GAAAAACCAA TTGCTGATAT TTTAGAATTT AATTTAAAAA AAGAAGGTTA CGACGTATAT TGCGCTTATG ACGGTAATGA CGCAGTAGAT TTAATCTATG AAGAAGAACC AGATATCGTC TTACTTGATA TCATGTTACC TGGTAGAGAT GGTATGGAAG TATGTCGTGA AGTGCGTAAA AAGTATGAAA TGCCGATTAT CATGCTGACA GCGAAAGATT CTGAAATTGA TAAAGTATTA GGCCTTGAAT TAGGTGCAGA TGATTACGTA ACTAAACCAT TTAGTACTCG TGAACTCATC GCACGTGTGA AAGCGAACTT ACGCCGTCAT TATTCACAAC CAGCTCAAGA AGTAAGTGGT GCGACAAATG AAATTACAAT TAAAGATATT GTGATTTATC CAGATGCATA TTCAATTAAA AAACGTGGAG AAGACATTGA ATTAACGCAT CGTGAATTCG AGCTATTCCA TTATCTTTCT AAACATATGG GTCAAGTCAT GACACGTGAA CACTTACTAC AAACAGTGTG GGGTTACGAT TATTTTGGTG ATGTTCGTAC TGTGGACGTA ACAATTCGCC GTTTAAGAGA AAAAATTGAA GATGATCCAT CTCATCCAGA ATACATTGTG ACACGTAGAG GCGTTGGATA CTTCCTCCAA CAACATGATT AG
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Protein sequence | MARKVVVVDD EKPIADILEF NLKKEGYDVY CAYDGNDAVD LIYEEEPDIV LLDIMLPGRD GMEVCREVRK KYEMPIIMLT AKDSEIDKVL GLELGADDYV TKPFSTRELI ARVKANLRRH YSQPAQEVSG ATNEITIKDI VIYPDAYSIK KRGEDIELTH REFELFHYLS KHMGQVMTRE HLLQTVWGYD YFGDVRTVDV TIRRLREKIE DDPSHPEYIV TRRGVGYFLQ QHD
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