Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0064 |
Symbol | |
ID | 4440453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 78181 |
End bp | 78888 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639671925 |
Product | DNA-binding response regulator |
Protein accession | YP_813914 |
Protein GI | 116628742 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.611294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAAAA AGATTTTAGT CGTTGACGAT GAAAAACCAA TTTCTGACAT TATTAAATTT AACTTGACTA AGGAAGGCTT TGATGTCGAC ACTGCTTATG ACGGCGAAGA AGCGGTTAAA AAAGTTGATG AATATGATCC AGACTTGATG ATTCTAGATC TAATGTTGCC TAAAAAAGAT GGCCTAGAAG TTGCACGGGA AGTACGTCAA ACTCACGATA TGCCAATTAT TATGGTAACT GCGAAAGATA CTGAAATTGA TAAGGTATTA GGACTTGAGA TGGGTGCAGA TGACTATGTT ACTAAGCCTT TCTCTAATCG AGAACTAGTT GCTAGAGTAA AGGCAAACCT ACGTAGACGT GATTTAACCC AAAAAGCTAC TGAAGATGAT GAAGATAAAA ATATTACTAT TAGCAATTTG GTAATTATGC CTGAAGCCTA TATGGTAGAA AAAAATGGCG AAAAAATTGA ATTAACACAT CGTGAATTTG AATTACTTCA TTATCTAGCT CAGCATATGG GTCAAGTGAT GACTAGGGAA CACTTGCTGC AAACCGTTTG GGGCTATGAT TACTTCGGGG ATGTTAGAAC TGTTGACGTA ACTGTTAGAC GTTTACGTGA AAAAATCGAA GATAATCCGA GTTCGCCAAC AATTTTAGTT ACACGGCGTG GAGTAGGATA TTACGTTAAA AACCCATCAG ATGAATAA
|
Protein sequence | MPKKILVVDD EKPISDIIKF NLTKEGFDVD TAYDGEEAVK KVDEYDPDLM ILDLMLPKKD GLEVAREVRQ THDMPIIMVT AKDTEIDKVL GLEMGADDYV TKPFSNRELV ARVKANLRRR DLTQKATEDD EDKNITISNL VIMPEAYMVE KNGEKIELTH REFELLHYLA QHMGQVMTRE HLLQTVWGYD YFGDVRTVDV TVRRLREKIE DNPSSPTILV TRRGVGYYVK NPSDE
|
| |