More than 300 homologs were found in PanDaTox collection
for query gene Cphamn1_1694 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  100 
 
 
236 aa  464  9.999999999999999e-131  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  79.24 
 
 
236 aa  385  1e-106  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  75.76 
 
 
233 aa  358  3e-98  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  72.65 
 
 
236 aa  354  5e-97  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  75.32 
 
 
236 aa  352  4e-96  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  71.93 
 
 
236 aa  335  3.9999999999999995e-91  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  69.16 
 
 
253 aa  323  1e-87  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  51.8 
 
 
236 aa  239  4e-62  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  51.57 
 
 
226 aa  228  5e-59  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  49.57 
 
 
243 aa  228  8e-59  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  50 
 
 
226 aa  228  9e-59  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  50.67 
 
 
225 aa  225  5.0000000000000005e-58  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  50.44 
 
 
225 aa  224  1e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  51.32 
 
 
225 aa  223  2e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  49.56 
 
 
230 aa  222  3e-57  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  51.34 
 
 
225 aa  223  3e-57  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  50.67 
 
 
226 aa  221  6e-57  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  49.12 
 
 
230 aa  221  8e-57  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  49.12 
 
 
230 aa  221  9.999999999999999e-57  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  48.65 
 
 
225 aa  219  3e-56  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  49.11 
 
 
226 aa  218  7.999999999999999e-56  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  47.6 
 
 
227 aa  217  2e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  48.42 
 
 
231 aa  216  2.9999999999999998e-55  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  45.85 
 
 
229 aa  211  1e-53  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  45.22 
 
 
230 aa  209  4e-53  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  50.45 
 
 
228 aa  208  5e-53  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  47.35 
 
 
227 aa  207  8e-53  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  46.49 
 
 
230 aa  207  9e-53  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  45.41 
 
 
229 aa  207  1e-52  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  45.54 
 
 
235 aa  207  1e-52  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  45.15 
 
 
239 aa  204  7e-52  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  45.15 
 
 
239 aa  204  7e-52  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  47.51 
 
 
228 aa  203  2e-51  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  50 
 
 
225 aa  201  6e-51  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  46.64 
 
 
225 aa  201  9.999999999999999e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  48.03 
 
 
235 aa  200  1.9999999999999998e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  50.67 
 
 
236 aa  200  1.9999999999999998e-50  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  44.4 
 
 
239 aa  197  1.0000000000000001e-49  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  42.48 
 
 
231 aa  197  1.0000000000000001e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  46.72 
 
 
225 aa  197  1.0000000000000001e-49  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  46.9 
 
 
229 aa  197  1.0000000000000001e-49  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  48.47 
 
 
227 aa  197  2.0000000000000003e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  45.5 
 
 
226 aa  196  3e-49  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_010001  Cphy_2855  two component transcriptional regulator  43.5 
 
 
224 aa  196  3e-49  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000952101  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  45.78 
 
 
226 aa  195  5.000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  45.81 
 
 
234 aa  194  7e-49  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  46.26 
 
 
229 aa  194  1e-48  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  41.77 
 
 
239 aa  194  1e-48  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  45.25 
 
 
234 aa  193  2e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  45.49 
 
 
233 aa  193  2e-48  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  43.56 
 
 
226 aa  192  3e-48  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  43.35 
 
 
238 aa  193  3e-48  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  48.23 
 
 
230 aa  192  3e-48  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  42.06 
 
 
235 aa  191  9e-48  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  42.31 
 
 
234 aa  191  1e-47  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  45.41 
 
 
231 aa  190  1e-47  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  42.92 
 
 
239 aa  191  1e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  47.77 
 
 
230 aa  189  5e-47  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  42.15 
 
 
239 aa  188  5e-47  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  40.6 
 
 
236 aa  188  8e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  42.04 
 
 
229 aa  187  9e-47  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  45.78 
 
 
230 aa  187  1e-46  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  46.7 
 
 
231 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  42.79 
 
 
232 aa  187  2e-46  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  45.78 
 
 
226 aa  186  2e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  42.34 
 
 
225 aa  186  3e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  42.73 
 
 
223 aa  186  4e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  42.73 
 
 
223 aa  186  4e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  44.74 
 
 
265 aa  186  4e-46  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  42.61 
 
 
232 aa  185  5e-46  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  43.1 
 
 
230 aa  185  6e-46  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  45.74 
 
 
228 aa  184  8e-46  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  44.93 
 
 
229 aa  184  8e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  44.16 
 
 
230 aa  184  9e-46  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  43.17 
 
 
223 aa  184  9e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  42.73 
 
 
223 aa  184  1.0000000000000001e-45  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1191  response regulator  42.73 
 
 
223 aa  184  1.0000000000000001e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  42.73 
 
 
223 aa  184  1.0000000000000001e-45  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  41.88 
 
 
235 aa  184  1.0000000000000001e-45  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  43.59 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  42.92 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  43.59 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  43.59 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  43.59 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  43.59 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  43.56 
 
 
225 aa  183  2.0000000000000003e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  43.59 
 
 
239 aa  183  2.0000000000000003e-45  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  46.67 
 
 
227 aa  183  2.0000000000000003e-45  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  42.29 
 
 
223 aa  183  2.0000000000000003e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  42.67 
 
 
226 aa  182  3e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  42.73 
 
 
223 aa  182  3e-45  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  42.73 
 
 
223 aa  182  3e-45  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2216  two component transcriptional regulator  43.05 
 
 
224 aa  182  3e-45  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  42.67 
 
 
238 aa  182  3e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  43.22 
 
 
234 aa  182  3e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  43.22 
 
 
239 aa  183  3e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  44.1 
 
 
272 aa  182  3e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  42.29 
 
 
223 aa  182  4.0000000000000006e-45  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  42.92 
 
 
239 aa  182  4.0000000000000006e-45  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  44 
 
 
226 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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