Gene Cphamn1_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1694 
Symbol 
ID6375381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1834202 
End bp1834912 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID642684188 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001960094 
Protein GI189500624 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000906935 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAGACC CATTGATTCT TGTCGTTGAG GATGACCGCA ACCTAGCAAA ACTTCTGAAA 
TACAATCTCG AAAAAGCAAG TTACAAATGT GTTCTTGCTG AATCCGGTGA GGAGGCACTT
CGATTGCTTG CCGATAGAGC TGTAGACCTT GTGCTTCTCG ATGTCATGCT TCCGGGGATC
GATGGTTTTG AGGTTTGCAG AAAGCTGAGG CAACAGCAGC TGCACAGGGA ACTGCCTATT
GTCCTGCTGA CAGCGAAGGG GGAGGAAATC GATAAAGTAT TGGGATTTGA ACTGGGGATA
GACGATTATG TCGTCAAGCC GTTCAGCCCG CGCGAACTGA ATCTGAGAAT CCGGGCTATA
CTGAAACGTG ACCGCAGGGG TAAGCAGGAT GTGAGAGAGG TGCTTGTCTG TGATGGTCTG
GAGGTTGATA TTGCGCGCCA TAGCGTGAAA CTTGATGGCA GGGACATTGT CCTGACTCTT
ATGGAATTCA AGCTTCTTGC AGTGCTGTTG AAACGACGGG GTCATGCCCA GTCACGCGAG
ACACTTCTGA GCGATGTGTG GGATGTCGAC AAGACAATAA ATACCCGCAC TATTGATACG
CATATTACCA GGTTGAGGGA GAAGCTTGGT GAAACCGGCA AGTACATAAA AACCGTCAGG
GGACTTGGTT ACAAGCTCGA GGAAAGCGGA GAAAGTAGTG AAAAACGCTA A
 
Protein sequence
MSDPLILVVE DDRNLAKLLK YNLEKASYKC VLAESGEEAL RLLADRAVDL VLLDVMLPGI 
DGFEVCRKLR QQQLHRELPI VLLTAKGEEI DKVLGFELGI DDYVVKPFSP RELNLRIRAI
LKRDRRGKQD VREVLVCDGL EVDIARHSVK LDGRDIVLTL MEFKLLAVLL KRRGHAQSRE
TLLSDVWDVD KTINTRTIDT HITRLREKLG ETGKYIKTVR GLGYKLEESG ESSEKR